KIT – University of the State of Baden-Württemberg and National Laboratory of the Helmholtz Association Institute for Data Processing and Electronics Introducing Andrei Shkarin Data processing

22 Personal Info Andrei Shkarin, 11 Feb. Kargasok Brother: Shkarin Roman, PhD KIT, LAS Bachelor StudentSchoolMaster StudentPhD Student Tomsk Polytechnic University Tomsk, Russia KIT Karlsruhe, Germany School #1 Kargasok, Russia Kargasok, Tomsk reg., RussiaTomsk, Russia ~455 km

33 Algebraic Reconstruction Techniques January 2013 – August KIT, IPE Study on Algebraic Reconstruction Techniques in X-ray CT, implementing a module for the UFO Framework for ART implementation. February 2014 – May 2014Master KIT, IPE Further study on Iterative Reconstruction Techniques, a priori knowledge, and projection models. Further work on the developed module. Quality

44 ASTOR Synchrotron light source Insects X-ray CT reconstruction Segmentation Challenges: Huge amount of data Data quality (artifacts, noise, low contrast, etc.) Lack of the efficient workflows and segmentation methods in software

55 ASTOR Project goal: Automatic & Semi-automatic segmentation for the data produced at ANKA and other synchrotrons. Review of the existing software (~ 23 entries) General info (license, last update, team, …); Provided methods; Features; Proposed workflows. Developing a workflow for the semi-automatic segmentation Research on the most efficient methods for our needs Design of the module & Implementation Review of the segmentation methods and related techniques

66 Skills & Experience Programming Languages: C/C++, C#, Objective C, Python Parallel processing: OpenCL, CUDA, POSIX threads, OpenMP Network programming: Microsoft RPC, Web Services XML technologies: XML, XSLT, XQuery, eXist-db Libraries / Frameworks: Glib, STL, Qt, UFO Web: Node JS, Ruby on Rails, JavaScript, PHP, CSS, HTML/XHTML, OAuth Other: Matlab, Mathcad, Mathematica, Fiji, CMake, LaTeX Work: 3 years as iOS Zennex Group Tomsk 2 KIT, IPE Karlsruhe