MfD EEG/MEG Source Localization 4 th Feb 2009 Maro Machizawa Himn Sabir Expert: Vladimir Litvak.

Slides:



Advertisements
Similar presentations
Clinical case studies Volumetric Measurements Visualization & Change Tracking Perfusion Analysis PET/CT Image Analysis Volumetric Analysis using 3D Slicer:
Advertisements

EEG-MEG source reconstruction
Interpreting Data in IX1D v 3 – A Tutorial
STATISTICAL ANALYSIS AND SOURCE LOCALISATION
ASENT_IMPORT.PPT Importing Data From Templates Last revised 11/03/2009.
Inversion Transforming the apparent to « real » resistivity. Find a numerical model that explains the field measurment.
MEG/EEG Inverse problem and solutions In a Bayesian Framework EEG/MEG SPM course, Bruxelles, 2011 Jérémie Mattout Lyon Neuroscience Research Centre ? ?
Y A S O O B A L I b o r n o n 1 9 t h F e b r u a r y i n K a n p u r d i s t r i c t o f U t t a r P r a d e s h. H e s t a r t e d s i n g i.
Coregistration and Normalisation By Lieke de Boer & Julie Guerin.
Overview Contrast in fMRI v contrast in MEG 2D interpolation 1 st level 2 nd level Which buttons? Other clever things with SPM for MEG Things to bear in.
Analysis of different gridding methods using “Surfer7”
1 TiVi80 – Spot Analyzer Welcome to the presentation of.
INVERSIONS AND CONSTRAINTS
Preprocessing II: Between Subjects John Ashburner Wellcome Trust Centre for Neuroimaging, 12 Queen Square, London, UK.
Advantages of using R.PC.R Software Now that you know some of the advantage let’s take a look at the software … Reliable and Comprehensive Reporting Recording.
Sensor & Source Space Statistics Sensor & Source Space Statistics Rik Henson (MRC CBU, Cambridge) With thanks to Jason Taylor, Vladimir Litvak, Guillaume.
Surgical Planning Laboratory -1- Brigham and Women’s Hospital Slicer Training 1: Loading and Viewing Data.
The M/EEG inverse problem and solutions Gareth R. Barnes.
How to Create a Book Purchase Request using Books in Print?
Introduction to SPM Batching
Source localization for EEG and MEG Methods for Dummies 2006 FIL Bahador Bahrami.
Source localization MfD 2010, 17th Feb 2010
Support.ebsco.com Basic EBSCOhost Searching for Public Libraries Tutorial.
DTU Medical Visionday May 27, 2009 Generative models for automated brain MRI segmentation Koen Van Leemput Athinoula A. Martinos Center for Biomedical.
SENSOR LEVEL ANALYSIS AND SOURCE LOCALISATION in M/EEG METHODS FOR DUMMIES Mrudul Bhatt & Wenjun Bai.
Generative Models of M/EEG: Group inversion and MEG+EEG+fMRI multimodal integration Rik Henson (with much input from Karl Friston)
1. CLICK “CONTACTS” (BOTTOM LEFT CORNER OF SCREEN) 2. SELECT “NEW CONTACT GROUP”
Coregistration and Spatial Normalisation
DCM for ERPs/EFPs Clare Palmer & Elina Jacobs Expert: Dimitris Pinotsis.
Week 11 Creating Framed Layouts Objectives Understand the benefits and drawbacks of frames Understand and use frame syntax Customize frame characteristics.
EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.
EEG/MEG source reconstruction
Loading Standard DWI 1.File/Open Standard/Double click on “..”/Go To Altas directory/Go to JHU directory 2.Load JHU-ICMB-T2 1mm Image from Atlase directory.
Contrasts & Inference - EEG & MEG Himn Sabir 1. Topics 1 st level analysis 2 nd level analysis Space-Time SPMs Time-frequency analysis Conclusion 2.
To access our web services, go to……. Click on Customer Login.
Wellcome Dept. of Imaging Neuroscience University College London
Learning the Structure of Related Tasks Presented by Lihan He Machine Learning Reading Group Duke University 02/03/2006 A. Niculescu-Mizil, R. Caruana.
1 Analytic Solution of Hierarchical Variational Bayes Approach in Linear Inverse Problem Shinichi Nakajima, Sumio Watanabe Nikon Corporation Tokyo Institute.
EEG/MEG source reconstruction
1 Setting up document titles selection list in EHR 1.Click on Tools 2.Choose Options.
Methods for Dummies Second level Analysis (for fMRI) Chris Hardy, Alex Fellows Expert: Guillaume Flandin.
Dynamic Causal Model for evoked responses in MEG/EEG Rosalyn Moran.
Multimodal Brain Imaging Wellcome Trust Centre for Neuroimaging, University College, London Guillaume Flandin, CEA, Paris Nelson Trujillo-Barreto, CNC,
Claritas 3D REFSTAT: Refraction statics calculations.
MfD Co-registration and Normalisation in SPM
M/EEG: Statistical analysis and source localisation Expert: Vladimir Litvak Mathilde De Kerangal & Anne Löffler Methods for Dummies, March 2, 2016.
1 Berger Jean-Baptiste
User Manual for Tmaptool – T1 ρ processing tool Guruprasad Krishnamoorthy Chetana Bayas Gargi Pednekar.
Searching for Images Improving the quality of your Google Search.
MEG Analysis in SPM Rik Henson (MRC CBU, Cambridge) Jeremie Mattout, Christophe Phillips, Stefan Kiebel, Olivier David, Vladimir Litvak,... & Karl Friston.
UPLOADING DOCUMENTS IN MURA. Two Options 1.Upload as a “page” in your navigation (preferred)  Easier to find, delete and maintain  Can upload revisions.
FLIGHT PATH GUI David Alfego Josh Harrison. PURPOSE  Trials flown in Microsoft Flight Simulator X  Data collected according to coordinates of each flight.
1 CW11 Visualizing ACE3P Results in ParaView Greg Schussman Menlo Park, CA October 10, 2011.
1 Yoel Kortick Senior Librarian Working with the Alma Community Zone and Electronic Resources.
1 Jean Daunizeau Wellcome Trust Centre for Neuroimaging 23 / 10 / 2009 EEG-MEG source reconstruction.
Imaging Source Reconstruction in the Bayesian Framework
Commutative Property of Addition
Statistical Analysis of M/EEG Sensor- and Source-Level Data
M/EEG Analysis in SPM Rik Henson (MRC CBU, Cambridge)
M/EEG Statistical Analysis & Source Localization
Dynamic Causal Model for evoked responses in M/EEG Rosalyn Moran.
Save for Web and Devices in PS
Commutative Property Associative Property A. Addition
ADMIT Doctoral Coordinators: Assigning Faculty Reviewers &
JFG de Freitas, M Niranjan and AH Gee
M/EEG Statistical Analysis & Source Localization
ADMIT Doctoral Coordinators: Assigning Faculty Reviewers &
Probabilistic Modelling of Brain Imaging Data
Commutative Property Associative Property A. Addition
DCM Demo – Model Specification, Inversion and 2nd Level Inference
Presentation transcript:

MfD EEG/MEG Source Localization 4 th Feb 2009 Maro Machizawa Himn Sabir Expert: Vladimir Litvak

Inverse problem 1.Existence 2.Unicity 3.Stability

1.Existence 2.Unicity 3.Stability Inverse problem

1.Existence 2.Unicity 3.Stability Inverse problem Introduction of prior knowledge is needed

Spatio-temporal modeling

Spatio-temporal modeling – step 1 Load EEG/MEG file

Spatio-temporal modeling – step 2 Name the analysis (optional)

Spatio-temporal modeling – step 3 Create/load meshes Bigger the parameter, better the resolution of the results

Spatio-temporal modeling – step 4 Coregister fiducial points with MRI Choose either of methods to coregister –“select” from default locations (at FIL) –“type” MNI coordinates directory –“click” manually each fiducial point from MRI images

Spatio-temporal modeling – step 4 Coregister fiducial points with MRI

Spatio-temporal modeling – step 5 Forward model

Spatio-temporal modeling – step 5 Bayesian model inversion

Spatio-temporal modeling – step 5 Invert: alternative models GS (greedy search: default): –iteratively add constraints (priors) ARD (automatic relevance determination): –iteratively remove irrelevant constraints COH (coherence): –LORETA-like smooth prior IID (independent identically distributed): –minimum norm

Spatio-temporal modeling – step 5 Invert: alternative models The bigger the number, the better the model

Spatio-temporal modeling – step 5 Invert: visualization options 1 digit (ms): map on that time(ms) 2 digits (ms): video during the period 3 digits (x y z): max. voxel on that MNI coordinate

Spatio-temporal modeling – step 6 Window : Induced: localization on each single trial then averaged Evoked: localization on already averaged data INDUCED IMAGE

Spatio-temporal modeling – step 7 Image

Group analysis: same analysis on multiple subjects

(Optional step5) Variational Bayes Equivalent Current Dipole

Optional: time-voltage display