Lifewatch tools. Software 2 data Species observations > 40 M records Tracking data birds : 1pos / 10min Taxonomy > 200.000 names Environmental data….

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Presentation transcript:

Lifewatch tools

Software 2 data Species observations > 40 M records Tracking data birds : 1pos / 10min Taxonomy > names Environmental data…. BIG data

Spatial data platforms OBIS species observations -> geoserver GBIF species observations -> geoserver ENVocean -> geoserver Habitat data (UCL) -> geoserver MarineRegions -> geoserver Geoserver = OGC webservices (WMS,WFS,WCS) Postgress/PostGIS Tomcat servers

Taxonomy & species information WORMS : all marine species WoRMS + AquaRES : marine + freshwater + antarctic PESI : all European species – Taxon matching => LSID – Synonym solving – Get taxon attributes / info MS SQL + PHP

Some Rshiny VLIZ Bat detector data: – Monthly monitoring stations: – Realtime buoy data: – Geoserver OGC: – Underway 1min interval: –

Processing platforms R Rstudio Rshiny server Rstudio server

LW VLIZ GEOserver1 WFS;WMS MS SQL RODBC PostGress RODBC Leaflet Datatables DynGraph CSV Excell R / Rshiny Rstudio server X users Rshiny server GEOserver2 WFS;WMS LB Underway data Buoy data Station data UVAbits data

LW VLIZ GEOserver1 WFS;WMS MS SQL RODBC PostGress RODBC Leaflet Datatables DynGraph CSV Excell R / Rshiny Rstudio server X users Rshiny server GEOserver2 WFS;WMS LB MongoDB Tax Backbone webservices Underway data Buoy data Station data UVAbits data Zooplankton Fytoplankton Habitat data ENVOcean data Marine areas Weather data Tidal data

LW ICT core Leaflet Datatables DynGraph CSV Excell R / Rshiny Rstudio server X users Rshiny server LB GEOserver1 WFS;WMS MS SQL RODBC PostGress RODBC GEOserver 2 WFS;WMS MongoDB Tax Backbone webservices Underway data Buoy data Station data UVAbits data Zooplankton Fytoplankton Habitat data ENVOcean data Marine areas Weather data Tidal data GEOserver1 WFS;WMS MS SQL RODBC PostGress RODBC GEOserver 2 WFS;WMS MongoDB Tax Backbone webservices GEOserver1 WFS;WMS MS SQL RODBC PostGress RODBC GEOserver 2 WFS;WMS MongoDB Tax Backbone webservices Leaflet Datatables DynGraph CSV Excell R / Rshiny Rstudio server X users Rshiny server Leaflet Datatables DynGraph CSV Excell R / Rshiny Rstudio server X users Rshiny server