Chi square and Hardy-Weinberg

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Presentation transcript:

Chi square and Hardy-Weinberg

Problem #1 A study on blood types in a population found the following genotypic distribution among the people sampled: 1101 were MM, 1496 were MN 503 were NN Calculate the allele frequencies of M and N, the expected numbers of the three genotypic classes (assuming random mating). Using X2, determine whether or not this population is in Hardy-Weinberg equilibrium.

GENOTYPE FREQUENCIES: MM (p2) = 1101/3100 = 0.356 MN (2pq) = 1496/3100 = 0.482 NN (q2) = 503/3100 = 0.162

ALLELE FREQUENCIES: Freq of M Freq of N p = p2 + 1/2 (2pq) 0.356 + 1/2 (0.482) = 0.356 + 0.241 = 0.597 Freq of N q = 1- p 1 - 0.597 = 0.403. This is more accurate than taking the square root of q2

EXPECTED GENOTYPE FREQUENCIES (assuming Hardy-Weinberg): MM (p2) = (0.597)2 = 0.357 MN (2pq) = 2 (0.597)(0.403) = 0.481 NN (q2) = (0.403)2 = 0.162

EXPECTED NUMBER OF INDIVIDUALS of EACH GENOTYPE: # MM = 0.357 X 3100 = 1107 # MN = 0.481 X 3100 = 1491 # NN = 0.162 X 3100 = 502

CHI - SQUARE (X2): X2 = Σ(O - E)2 / E = (-6)2 /1107 + (5)2 /1491 + (-1)2 /503 = 0.0325 + 0.0168 + 0.002 = 0.0513 X2 (calculated) < X2 (table) [3.841, 1 df, 0.05 ].

Accept or Reject Therefore, conclude that there is no statistically significant difference between what you observed and what you expected under Hardy-Weinberg. Accept null hypothesis and conclude that the population is in HWE. Population is not evolving