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Biological organization 1. Biological molecules 2. Cellular organization
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Important biological molecules Small molecules Polymers/macromolecules
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Small molecules 1.Carbohydrates/sugars Source of energy Structural component Component of nucleic acids Protein modifier
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Small molecules Nitrogenous Base Five carbon sugar Phosphate backbone 2. Nucleotides
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Small molecules 2.Nucleotides Component of nucleic acids (genetic information) Energy storage (ATP/GTP/etc.) Facilitate reaction catalysis (eg. coenzyme A)
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Small molecules 3.Amino acids Components of proteins Source of energy Intercellular communication etc.
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Small molecules 3.Amino acids 20 “common” amino acids Carboxylic acid, amino group, ‘R’-group Alpha carbon (in most amino acids) is a stereocenter: L for life
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Small molecules 1.Carbohydrates 2.Nucleotides 3.Amino acids 4.(Water)
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Macromolecules 1.Nucleic acids Polymers of nucleotides Genetic information encoded in the sequence of bases
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Nitrogenous Base Five carbon sugar Phosphate backbone
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Nucleotides polymerize via phosphodiester bonds
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Macromolecules 2.Lipids Source of energy Form protective cell membrane Intra- and inter-molecular communication
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Macromolecules 3.Proteins Polymers of amino acids Source of energy Structural components Enzymes etc.
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Macromolecules 1.Nucleic acids (polymers of nucleotides) 2.Lipids 3.Protein (polymers of amino acids)
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The cell Maintain/transfer genetic material Produce macromolecules Protect itself Take in nutrients Harvest energy
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Eukaryotic cells contain “organelles” Functions are compartmentalized within the cytoplasm Nucleus ER/Golgi Cell membrane Mitochondria
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Nucleus: Maintain & Transfer Genetic Information DNA –Copy –‘Read’: Transcription → Make RNA RNA → protein = “Translation” –Proofread: check/repair damage Define cellular characteristics
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Information is carried in the base purines pyrimidines “CUT one piece of ‘py’”
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Produce macromolecule Endoplasmic reticulum/Golgi: Ribosomes –Structures that assemble proteins from amino acids –Proteins on rough ER Smooth ER: lipid synthesis Golgi –Further protein processing, sugar incorporation
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Ribosomes Huge multi-component structures –Millions of daltons –Protein and nucleic acid components –Considered an ‘organelle’
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Cell protection Plasma membrane Lipid bilayer, proteins, carbohydrates, etc.
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Cell membrane: lipid bilayer
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Energy harvest: mitochondria Citric acid cycle (oxidation of pyruvate) Electron transport (generation of a proton gradient) ATP synthesis
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