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Julian Avila, Timothy Devarenne Characterization of the interaction of the negative regulator of cell death Adi3 with the SnRK complex.

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Presentation on theme: "Julian Avila, Timothy Devarenne Characterization of the interaction of the negative regulator of cell death Adi3 with the SnRK complex."— Presentation transcript:

1 Julian Avila, Timothy Devarenne Characterization of the interaction of the negative regulator of cell death Adi3 with the SnRK complex

2 Pseudomonas syringae Photo: Gordon Vrdoljak, Electron Microscopy Laboratory, U.C. Berkeley Bacterial speck disease DISEASE PROGRAMMED CELL DEATH (PCD) ?

3 AvrPto-dependent Pto-interacting protein 3 Adi3 Devarenne et al. (2006) EMBO J. Adi3 is a protein kinase Silencing of Adi3 causes localized cell death Kinase defficient (K337Q) Constitutively active (S539D)

4 How is Adi3 a cell death suppressor? Bait Adi3 Prey PDK1 Bicoid Atg8 At3g13230 Thioredoxin E3 Ubiquitin Ligase SnRK autophagy putative TF cellular reduction /oxidation state ubiquitination Kinase Y2H screen using Adi3 as a bait SnRK SnrK1 pJG4-5 pEG202 SnRK Adi3 SnRK Prey Bait (PULLED DOWN) Kinase defficient (K337Q) Constitutively active (S539D)

5 SNF (Sucrose Non Fermenting) SNF4 SIP1 GAL83 IT IS THE CATALYTIC SUBUNIT OF THE SNF1 RELATED KINASE COMPLEX (β)(β) (γ)(γ) What is SnRK? (Sucrose non-fermenting related kinase) (α)(α) SnRK AMPK (AMP Dependent-Kinase) AKIN SnRK

6 SnRK > GAL83 > SnRK > GAL83 > Adi3 > Is SnRK an active kinase? ATP ADP Is Adi3 phosphorylated by the complex? P P Does Adi3 phosphorylate GAL83 (β)? (γ)(γ) (β)(β) ? (α)(α) (β)(β) (γ)(γ) ATP ADP GAL83 > Adi3 > GAL83 > Adi3 > SnRK

7 α-MBP Does Adi3 phosphorylate both GAL83 (β1) and SIP1 (β2) ? Is Adi3 able to interact with both β subunits? GAL83/SIP1 > Adi3 > GAL83/SIP1 > Adi3 > P (β)(β) α-GST ? ATP ADP SIP1 GAL83

8 P? Which residue(s) is(are) phosphorylated on GAL83 by Adi3? - Mutagenesis screen on serines.

9 S26 ? SnRK-complex mediated stress responses? Programmed cell death? SnRK-complex mediated stress responses? Programmed cell death? ?

10 Andrey Belyanin Devarenne Lab Members: Anna Nelson Joel Gray Taylor Weiss Julissa Ek-Ramos Remington Fenter Committee Members: Dr. Tim Devarenne Dr. J.P. Pellois Dr. Paul Straight Dr. Michael Kolomiets Funding: Acknowledgements


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