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Workflow-Driven Science using Kepler Ilkay Altintas, PhD San Diego Supercomputer Center, UCSD altintas@sdsc.edu words.sdsc.edu
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Scientific Workflow-Driven Science Experiment-oriented workflow notebook Moving large-scale data efficiently Building multi-scale workflows that enable large scale model assembly Tracking provenance for reproducibility Workflow Design Reporting Workflow Monitoring Workflow Execution Workflow Scheduling and Execution Planning Run Review Provenance Analysis Deploy and Publish Accelerate Workflow Design and Reuse via a Drag-and-Drop Visual Interface Facilitate Sharing Schedule, Run and Monitor Workflow Execution Analyze Results Support for end-to-end computational scientific process BUILD SHARE RUNLEARN
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Kepler is a Scientific Workflow System Ptolemy II: A laboratory for investigating design KEPLER: A problem-solving environment for Scientific Workflow KEPLER = “Ptolemy II + X” for Scientific Workflows A cross-project collaboration … initiated August 2003… 2.4 released 04/2013 Builds upon the open-source Ptolemy II framework www.kepler-project.org
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A Typical Kepler Workflow A green box is called an ‘actor’, which performs a task. This special actor represents an annotation component, such as BLAST search. Workflow parameters, which can be specified by users in the portal, are passed to workflow components. Data flow is divided.
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Kepler is a Team Effort Ptolemy II NIMROD/K Full list of contributors, projects, individuals and funding info are at the Kepler website!! Cross-project collaboration Initiated August 2003 Kepler 2.4 release: April, 2013
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Data Science Workflows in Kepler - Programmable Scalability - Access and query data Scale computational analysis Increase reuse Save time, energy and money Formalize and standardize Real-Time Hazards Management wifire.ucsd.edu Data-Parallel Bioinformatics bioKepler.org Scalable Automated Molecular Dynamics and Drug Discovery nbcr.ucsd.edu kepler-project.org words.sdsc.edu
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