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Analysis of Surveillance Data Philippe Dubois From Denis Coulombier, Julia Fitzner, Augusto Pinto & Marta Valenciano, WHO-HQ/LYON April 8 – 12, 2013 Phom Penh, Cambodia
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Data characteristics Data validation Descriptive analysis Hypothesis testing Analysis of Surveillance Data
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Data Characteristics Various sources of notification Various levels of qualification Continuous data collection subject to change
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Surveillance Data Validation Frequency distributions missing values expected distribution digit attraction Cross-Tabulations age, sex, logical errors by source: collect bias ?
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Notifications of All Notifiable Diseases by Date of Onset, USA, 1989
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Birth weight Distribution, in Pounds Fermattes Hospital, Haiti, February 1994
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Descriptive Approach Time Place Persons Generating hypotheses
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Analyzing Time Characteristics Graphical analysis The 3 data components secular trend seasonal variations accidental variations
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Notifications of Foodborne Outbreaks in France, 1996-1998
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199619971998
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Components of Surveillance Data Signal secular trend seasonal variations accidental variations
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Decomposition of Surveillance Data Signal
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Descriptive analysis of Components Moving averages empirical method for reducing variability same area under the curve Logarithmic scale dynamic analysis of changes difficult to interpret
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Calculation of moving averages 1993 Jan Feb Apr Jun Aug Jul Sep Oct Dec Mar May Nov 869 726 945 834 465 822 654 872 546 728 692 3622/5=724,4 3690/5=738.0 3836/5=767.2 5 month window 890
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Notification of giardiasis in Delaware, 03/1991-03/1995 Crude Weekly Data
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12 Week Moving Average Notification of giardiasis in Delaware, 03/1991-03/1995
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52 Week Moving Average
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Notification of giardiasis in Delaware, 03/1991-03/1995 Aggregated data
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Size of the Moving Average Window empirical approach: the visual impression inversely proportional to the number of cases increases as the variance increases 1. Showing cyclical variations by removing accidental variations
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Effect of the Moving Average Window Size Weekly Notifications of Salmonellosis, Georgia, 1993-1994 3 weeks 7 weeks 5 weeks 10 weeks
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Size of the Moving Average Window Cycle span 52 for weekly data 12 for monthly data 4 for quarterly data 2. Showing secular trend by removing cyclical variations
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Cases of Gonorrhea in Michigan Week 10 of 1994 and 208 Previous Weeks
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Cases of Gonorrhea in Michigan Week 10 of 1994 and 208 Previous Weeks
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Descriptive Analysis of the 3 Components Moving average empirical method variability reduction same area under the curve Logarithmic scale dynamic analysis of changes difficult to interpret
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Annual Rate of Tuberculosis, United States, 1940-1990
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MALARIA- By year, United States, 1930-1992
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MALARIA- By Year, United States, 1930-1992 MALARIA- By year, United States, 1930-1992
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GONORRHEA - By race and ethnicity, United States, 1981-1993 Arithmetic scale
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GONORRHEA - By race and ethnicity, United States, 1981-1993 Logarithmic scale Source: Summary of Notifiable Diseases, United States 1993 GONORRHEA - By race and ethnicity, United States, 1981-1993
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Typhoid Notifications in France
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Interpreting the results Role of chance Role of bias True disease pattern
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Conclusions Analysis to draw attention Validation by investigation
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Questions? Comments? Discussions?
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