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Published byBarbra Jacobs Modified over 8 years ago
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Detecting Polymorphisms in Mouse Genome Phillip Tao Advisor: Eleazar Eskin Grad Student: Emrah Kostem
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Ruby on Rails Using Ruby on Rails to create web server MySQL to store data Display data gathered using BLAT
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Pygr Python based tool for sequencing data Can compare two or more strains Tried using to find inversions Takes too long / too resource intensive
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BLAT Similar in function to Pygr Significantly less memory intensive Will be used to find and map polymorphisms
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Roadmap Significantly less progress than expected Web server mostly functional by January Winter quarter to map polymorphisms Spring quarter to use map of polymorphisms and predict phenotype
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