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Dynamic Causal Models Will Penny Olivier David, Karl Friston, Lee Harrison, Stefan Kiebel, Andrea Mechelli, Klaas Stephan MultiModal Brain Imaging, Copenhagen, October 25-26, 2005 V1V5SPC V1 V5 SPC Wellcome Department of Imaging Neuroscience, ION, UCL, UK.
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Contents Neurodynamic model Hemodynamic model Model estimation and comparison Attention to visual motion Friston et al.(2003) Neuro- Image, 19 (4), pp. 1273-1302.
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Contents Neurodynamic model Hemodynamic model Model estimation and comparison Attention to visual motion
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Single region u2u2 u1u1 z1z1 z2z2 z1z1 u1u1 a 11 c
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Multiple regions u2u2 u1u1 z1z1 z2z2 z1z1 z2z2 u1u1 a 11 a 22 c a 21
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Modulatory inputs u2u2 u1u1 z1z1 z2z2 u2u2 z1z1 z2z2 u1u1 a 11 a 22 c a 21 b 21
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Reciprocal connections u2u2 u1u1 z1z1 z2z2 u2u2 z1z1 z2z2 u1u1 a 11 a 22 c a 12 a 21 b 21
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Neurodynamics Inputs Change in Neuronal Activity Neuronal Activity Intrinsic Connectivity Matrix Modulatory Connectivity Matrices Input Connectivity Matrix V1 V5 SPC
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Contents Neurodynamic model Hemodynamic model Model estimation and comparison Attention to visual motion Single word processing
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Hemodynamics Hemodynamic variables For each region: Hemodynamic parameters Seconds Dynamics
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Why have explicit models for neurodynamics and hemodynamics ? For 4 event types u 1, u 2, u 3, u 4 : In a GLM for a single region, y=X +e, with 3 basis functions per event type (canonical,shifter, stretcher) there are 12 parameters to estimate. These relate hemodynamics directly to each stimulus. In a (single region) DCM there are 4 neuronal efficacy parameters relating neuronal activity to each stimulus And 5 hemodynamic parameters relating neuronal activity to the BOLD signal. A total of 9 parameters.
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DCM Priors Hemodynamics Rate of signal decay: 0.65 Elimination rate: 0.41 Transit time: 0.98 Grubbs exponent: 0.32 Oxygenation fraction: 0.34 E[h] Cov[h] Neurodynamics Stability priors ensure principal Lyapunov exponent is less than zero with high probability.
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Contents Neurodynamic model Hemodynamic model Model estimation and comparison Attention to visual motion Single word processing
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Bayesian Estimation Relative Precision Weighting Normal densities
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Multiple parameters One-step if C e, C p and p are known General Linear Model
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Nonlinear models Gauss-Newton ascent with priors Linearization Current Estimates Friston et al.(2002) Neuro- Image, 16 (2), pp. 513-530.
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Model Comparison I V1 V5 SPC Model, m Parameters: Prior Posterior Likelihood Evidence Laplace, AIC, BIC approximations Model fit + complexity Penny et al. (2004) NeuroImage, 22 (3), pp. 1157-1172.
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Model Comparison II V1 V5 SPC Model, m Parameters: Prior Posterior Likelihood Prior Posterior Evidence Parameter Model
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Model Comparison III V1 V5 SPC Model, m=i V1 V5 SPC Model, m=j Model Evidences: Bayes factor: 1 to 3: Weak 3 to 20: Positive 20 to 100: Strong >100: Very Strong
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Contents Neurodynamic model Hemodynamic model Bayesian estimation Attention to visual motion Single word processing
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Attention to Visual Motion STIMULI 250 radially moving dots at 4.7 degrees/s PRE-SCANNING 5 x 30s trials with 5 speed changes (reducing to 1%) Task - detect change in radial velocity SCANNING (no speed changes) 6 normal subjects, 4 100 scan sessions; each session comprising 10 scans of 4 different condition 1.Photic 2.Motion 3.Attention Experimental Factors Buchel et al. 1997
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Specify regions of interest Identify regions of Interest eg. V1, V5, SPC GLM analysis V1 V5 SPC Motion Photic Att Model 1
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V1 V5 SPC Motion Photic Att Model 1 V1 V5 Estimation SPC Time (seconds)
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Posterior Inference B 3 21 P(B 3 21 |y) How much attention (input 3) changes connection from V1 (region 1) to V5 (region(2)
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V1 V5 SPC Motion Photic Att Model 1 Motion Photic Att V1 V5 SPC Model 2 Bayes Factor B 12 > 10 19 Very Strong
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V1 V5 SPC Motion Photic Att Model 1 V1 V5 SPC Motion Photic Att Model 3 Bayes Factor B 13 =3.6 Positive
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V1 V5 SPC Motion Photic Att Model 1 Motion Photic Att V1 V5 SPC Model 4 Bayes Factor B 14 =2.8 Weak Penny et al. (2004) NeuroImage, Special Issue.
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Summary Neurodynamic model Hemodynamic model Bayesian estimation Attention to visual motion
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