1. NA-MIC National Alliance for Medical Image Computing http://na-mic.org Three ways to use the NA-MIC kit Sonia Pujol, Ph.D. Instructor of Radiology Surgical Planning Laboratory Harvard Medical School National Centers for Biomedical Computing 2008 AHM National Institutes of Health

2. Sonia Pujol, Ph.D. National Alliance for Medical Image Computing The NA-MIC Kit CMakeCTestDartBatch MakeXNAT 3D SlicerVTKITKNrrdKWidgets

3. Sonia Pujol, Ph.D. National Alliance for Medical Image Computing 3D Slicer Open-source application available for Windows, Linux and Mac 3.2 million lines of code Neuroscience and Image-Guided Therapy

4. Sonia Pujol, Ph.D. National Alliance for Medical Image Computing The NA-MIC kit from three user perspectives Clinical researchers Biomedical engineers Algorithm developers

5. NA-MIC National Alliance for Medical Image Computing http://na-mic.org Interact in 3D to enhance data interpretation Clinical researchers

6. Sonia Pujol, Ph.D. National Alliance for Medical Image Computing Visualize User-driven views of anatomical structures Overlay between 2D grey-levels images and 3D anatomical structures Intuitive interaction with the 3D models

7. NA-MIC National Alliance for Medical Image Computing http://na-mic.org Extract relevant information from complex data Biomedical Engineers

8. Sonia Pujol, Ph.D. National Alliance for Medical Image Computing Analyze Advanced analysis of complex data Multimodal data fusion Clinical parameters extraction

9. NA-MIC National Alliance for Medical Image Computing http://na-mic.org #include "itkDiscreteGaussianImageFilter.h" int main ( int argc, char * argv[]) { PARSE_ARGS; typedef itk::Image ImageType; typedef itk::ImageFileReader ReaderType; typedef itk::ImageFileWriter WriterType; ReaderType::Pointer reader = ReaderType::New(); WriterType::Pointer writer = WriterType::New(); reader->SetFileName( FilterInputVolume.c_str() ); writer->SetFileName(FilterOutputVolume.c_str()); typedef itk::DiscreteGaussianImageFilter FilterType; FilterType::Pointer filter = FilterType::New(); Develop plug-ins to extend image analysis capabilities Algorithm Developers

10. Sonia Pujol, Ph.D. National Alliance for Medical Image Computing Create Integrate external executables with the Slicer3 platform Develop plug-ins in C++, Tcl or Python Build upon the NA-MIC kit to meet your scientific goals

11. NA-MIC National Alliance for Medical Image Computing http://na-mic.org Translate techniques into skills Clinical researchers Biomedical engineers Algorithm developers

12. Sonia Pujol, Ph.D. National Alliance for Medical Image Computing Learn NA-MIC Training Compendium & Workshops