2. DNA: Deoxyribonucleic Acid The Carrier of Genetic Information ESSENTIAL QUESTIONS: 1. Which experiments led to the discovery of DNA as the genetic material? 2. What is the basic structure of DNA? 3. What is the basic structure of a chromosome?

3. p. 303 So Which Came First? DNA or Proteins (Enzymes) Gene Expression/ Protein Synthesis

4. WHAT MACROMOLECULE DOES DNA BELONG? DNA is a nucleic acid. Nucleic acids contain the elements Carbon, Hydrogen, Oxygen, Nitrogen and Phosphorus. (CHON-P) The monomer for a Nucleic Acid is a Nucleotide. A nucleotide is made of 3 parts: 1. 5 carbon sugar (pentose) 2. a phosphate group 3. a nitrogen base (there are 4) phosphate sugar Nitrogen base

5. Nucleic Acids Two Types: – DNA DeoxyriboNucleic Acid – RNA RiboNucleic Acid RNA

6. What material contains the inheritable information? Proteins? Carbohydrates? Lipids (fats)? or Nucleic Acids? TIMELINE: 1900s – Proteins were believed to carry inheritable information 1928 - First major experiment performed on mice using bacteria to identify the transforming substance. 1952 – DNA, not protein, is demonstrated to be involved in viral reproduction. Research supports the hypothesis that DNA carries inheritable traits 1990 – Human Genome Project Started 2001 – Human Genome Project Completed. 1944 – DNA is definitely identified as the transforming principle 1953 - Structure of DNA was proposed

7. The Human Genome Project (HGP) was an international scientific research project with the goal of determining the sequence of chemical base pairs which make up human DNA, and identifying and mapping all of the genes of the human genome from both a physical and functional standpoint. WHAT IS A GENOME? - the complete set of genes or genetic material present in a cell or organism

8. Frederick Griffith Experiment Griffith experimented with mice and 2 strains of the bacteria Streptococcus pneumonia to see which strain would be transformed. Mouse lives Mouse dies Mouse lives Mouse dies

9. The Avery and Hershey-Chase Experiments We knew: Chromosomes carried genetic information But Which Part? Protein or DNA? Hershey and Chase used radioactive isotopes to “label” or tag the DNA and the protein of the viruses some viruses were grown so that their DNA contained radioactive phosphorous ( 32 P) other viruses were grown so that their protein coats contained radioactive sulfur ( 35 S)

10. The Avery and Hershey-Chase Experiment After the labeled viruses were allowed to infect bacteria, only bacteria infected with the 32 P viruses had the 32 P label in their interior The conclusion was that the genes that viruses use to specify new viruses are made of DNA and not protein Figure 12.2 The Hershey-Chase experiment.

11. Please note that due to differing operating systems, some animations will not appear until the presentation is viewed in Presentation Mode (Slide Show view). You may see blank slides in the “Normal” or “Slide Sorter” views. All animations will appear after viewing in Presentation Mode and playing each animation. Most animations will require the latest version of the Flash Player, which is available at http://get.adobe.com/flashplayer.

12. Discovering the Structure of DNA DNA is comprised of subunits called nucleotides each DNA nucleotide has three parts a central deoxyribose sugar a phosphate group an organic nitrogen base

13. Nucleotides differ with regards to their bases Large bases (purines) with double-ring structure either adenine (A) or guanine (G) Small bases (pyrimidines) with single rings either cytosine (C) or thymine (T) Erwin Chargaff noted that DNA molecules always had equal amounts of purines and pyrimidines Chargaff’s rule suggested that DNA had a regular structure the amount of A always equaled the amount of T the amount of C always equaled the amount of G A or G T or C

14. Complementary base pairing in DNA 1)Hydrogen bonding between the nitrogenous bases holds the two chains in a helix 2) Base pairing follows specific rules Base-pairing rules for DNA Adenine (A) forms two hydrogen bonds with thymine (T) Guanine (G) forms three hydrogen bonds with cytosine (C) Vid

15. Rosalind Franklin’s work in 1953 using X-ray diffraction revealed that DNA had a regular structure that was shaped like a corkscrew, or helix Francis Crick and James Watson elaborated on the discoveries of Franklin and Chargaff and deduced that the structure of DNA was a double helix (built in 1953) (two strands of DNA bound together by hydrogen bonds between the bases because a purine of one strand binds to a pyrimidine on the other strand to form a base pair, the molecule keeps a constant thickness)

16. DNA & Replication

17. Why does DNA replicate? Make new cells for: Growth Repair Reproduction

18. Cell division and DNA replication Cells divide in a process called Mitosis  Growth, Repair, Replacement Before cells divide they have to double cell structures, organelles and their genetic information

19. DNA Replication is called Semiconservative Replication the DNA unzips and new complementary strands are assembled using each parent strand as a template leaving one original strand preserved in each duplex created and one new strand.

20. Enzymes involved in DNA Replication DNA replicates through the use of several enzymes: Helicase unwinds the DNA to expose the templates creating a replication fork RNA polymerase Adds an RNA primer to jump start replication DNA polymerase adds the correct complementary nucleotide to the growing daughter strand but can only add nucleotides to the 3´ end of an existing strand or primer DNA Ligase seals fragments of DNA together

21. How nucleotides are added in DNA replication

22. HOW DNA COPIES ITSELF 1.At the replication fork, the enzyme, RNA Polymerase adds a primer to the DNA strand to mark the spot where DNA Polymerase will start. 2.DNA replicates by adding to the 3’ end (5’ to 3’) using one template. DNA polymerase adds matching nucleotides in a continuous fashion. This is called the Leading Strand. DNA Polymerase can build a strand in one direction only. 3.The second strand of DNA assembled is made of segments called Okazaki fragments, each one beginning with a primer. The segments are joined together to form the Lagging Strand.

23. Building the leading and lagging strands

24. DNA Replication Steps 1. DNA unwinding 2. Unzipping (hydrogen bonds break) 3. New strands made– free floating nucleotides form to build new strand Note: DNA replication is said to be Semi-conservative because: One strand is the original (conserved) One strand is freshly assembled (semi-half)

25. Please note that due to differing operating systems, some animations will not appear until the presentation is viewed in Presentation Mode (Slide Show view). You may see blank slides in the “Normal” or “Slide Sorter” views. All animations will appear after viewing in Presentation Mode and playing each animation. Most animations will require the latest version of the Flash Player, which is available at http://get.adobe.com/flashplayer.

27. Because so much DNA is being replicated in the many cells of the body, there is a potential for errors to occur DNA repair involves comparing the daughter strand to the parent DNA template to check for mistakes. The proofreading is not perfect because mutations are still possible, although rare; however, genetic variation is the raw material of evolution

28. DNA replication DNA Double helix game http://nobelprize.org/educational_games/ medicine/dna_double_helix/