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In the Weeds with Soil Information
From Experiments to Operational Systems Alistair Ritchie Informatics, Research and Applications Team
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How this brain dump should go
How we worked with a community to formalise distributed publication of our soil observation data How that work influences operational systems The good news: it does The bad news: it does
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OGC Soil Data Interoperability Experiment
Initiated by the IUSS Working Group on Soil Information Standards Participants from Australia, Europe, North America, New Zealand Reconcile five existing standards … … into a single standard
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UH OH Not quite … point to prove … can use existing standards
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Soil Observations ISO19156/OGC10-004r3 - Observations and Measurements
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Soil Sensors OGC15-043r3 – Timeseries Profile of Observations and Measurements
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Soil Descriptions OGC16-088r3 - OGC Soil Data Interoperability Experiment Podzol Soil (Z) [NZSC] Ah E texture bulk density organic carbon particle size distribution … Bh C
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Soil IE Implementation
Maps Sensor Data Soil Data Execute PTFs Gridded Data HTTP URIs (conneg) Vocabularies Soil Taxonomies Observable Properties WFS WPS SOS Registry PID Service Client WCS WMS
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Unnecessary Specialization
Not much to say now Tackled head on this week … ‘what is a sample?’ Hugely important for us down in the weeds Adds unnecessary complexity (Arguable) domain specific concepts but not domain specific messaging Soil scientists don’t work in isolation
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Pedology is a cross-domain science
Digital Soil Mapping Integrating data from multiple domains Let’s lower the data integration overhead
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Keepin’ it real … the NZ National Soils Data Repository
O&M/OMLite SOSA PROV-* Reg SKOS SHACL RDFS … ANZSoilML GeoSciML Big Bucket of Data Mediation Layer Publication Layer -> ReST API (JSON, XML) -> LD API (RDF) -> SPARQL (RDF) -> OGC W*S (GML …) -> Data download (CSV, SQLite, …) Clients … Comprehensive Structured Atomic Views supporting Operational science Publication of science Government decisions Clients … Clients … Clients …
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Keepin’ it real … POWERFUL re-usable framework
O&M/OMLite SOSA PROV-* Reg SKOS SHACL RDFS … … Big Bucket of Data Mediation Layer Publication Layer -> ReST API (JSON, XML) -> LD API (RDF) -> SPARQL (RDF) -> OGC W*S (GML …) -> Data download (CSV, SQLite, …) Clients … Comprehensive Structured Atomic Views supporting Operational science Publication of science Government decisions Clients … Clients … Clients …
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Wrap up Distributed data problem requirement opportunity
Linked Data brings rigour to the solutions to this opportunity and a community that is solving problems science data providers have Science is complex enough as it is – we must be careful not to compound that
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Wrap up We work with amazing and gifted ‘science programmers’ - they are rare Many of us rely on (amazing and gifted) software engineers – usually with no science background When we consider the organisation of a data and the behaviour of our systems we must remember that Can’t set the barrier to use too high
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