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An Introduction to Latent Curve Models
Instructor: Shelley Blozis, UC Davis
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Outline Longitudinal panel study design Latent Curve Models
Missing Data Some examples of fitting latent curve models using Mplus and SAS PROC MIXED
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Longitudinal Panel Design
A sample of subjects is observed at multiple points in time The timing of the measurements can be the same for all individuals Fixed Occasions Design Or the timing can vary between individuals Varying Occasions Design
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Latent Growth Curve Models
One of several different statistical methods for the analysis of longitudinal panel data Assume that all individuals in a population have the same functional form But the parameters of the function vary between individuals This allows for the individual curves to vary
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Brief Detour: common factor analysis
The latent curve model is based on a latent variable model
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Common factor model X1 = λ1 + δ1 X2 = λ2 + δ2 X3 = λ3 + δ3 X = Λξ + δ
X : set of manifest variables Λ : factor loading matrix ξ : factors (latent variables) δ : set of uniquenesses
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Common factor model with a mean structure
X = τ + Λξ + δ X is the set of manifest variables τ is the set of intercepts Λ is the factor loading matrix ξ is the set of factors (latent variables) δ is the set of uniquenesses
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Latent Variables Multiple manifest variables serve as indicators of an underlying, unobserved variable Indicators are reflective of the construct Example: intelligence, self-esteem, life satisfaction
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Similar to the common factor analysis model with the mean structure, the latent curve model is used to account for the means, variances and covariances of the observed scores measured over time
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Making the distinction
Factor analysis The factors of a factor analysis model represent unobservable variables, such as intelligence or self-esteem In a latent curve model, the factors represent characteristics of change Not latent variables in the standard sense Represent unobservable characteristics of change
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Let yti be an observed test score
Longitudinal panel study: Intellectual test score for n = 100 children assessed up to four times at different ages Let yti be an observed test score t is an occasion, t = 1,…,4 i is the individual
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Using this framework, specify a form of change for the response
A latent curve model yi = Ληi + εi Based on a common factor model with a mean structure Using this framework, specify a form of change for the response
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If a measured response is modeled by a linear function of time, then a latent curve model could be specified as where
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Model intellectual test scores using a linear function of children’s age
Individual i’s expected rate of change The expected value of yi at Agei = 0 The expected value of yi at (Agei – 5)
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Linear Growth Model But often the intent is to describe variation between individuals in the coefficients and possibly account for this variation From this model we can estimate each individual’s set of coefficients We can also estimate the population trajectory
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Use the individual-specific coefficients to estimate each person’s trajectory
We can then work with the model to describe variation between individuals in their response level and rate of change
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Linear growth model The coefficients are each a sum of
a fixed effect (a constant for the population) and a random effect (unique to the individual)
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Model Assumptions The residual
Assume that the responses of each individual follow an underlying trajectory; here we assume linear growth The observations are assumed to be due to this trajectory plus other factors that are captured in the residual Other factors include possible measurement error, as well as other factors apart from time
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An illustration Observed scores that includes measurement error
“inherent” trajectory for an individual Scores free of measurement error
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Model Assumptions The residual
Assume that the responses of each individual follow an underlying trajectory; here we assume linear growth The observations are assumed to be due to this trajectory plus other factors that are captured in the residual Other factors include possible measurement error, as well as other factors apart from time Possible assumptions about the residuals Independent between individuals Independent within individuals Constant variance across time
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Model Assumptions The person-specific coefficients
Assume the coefficients vary between individuals according to the random effects, b0i and b1i
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An illustration The ‘typical’ trajectory
“inherent” trajectory for an individual Observed scores Source: Harring & Blozis (2014), Behav Res, 46,
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Model Assumptions The person-specific coefficients
Assume the coefficients vary between individuals according to the random effects, b0i and b1i Each individual can have a curve that is unique from those of others Under the model, b0i and b1i are often assumed to be normally distributed, means equal to 0 Each has a variance to describe individual differences The two random effects can covary
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Model Assumptions The population model Describes the typical response
Figure adapted from Blozis & Harring (2016), Structural Equation Modeling, 23(6),
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Latent Curve Models versus Multilevel Models
We have options in how we approach the analysis Latent curve models As a structural equation model (SEM) Multilevel models It’s possible to specify equivalent models under the two approaches, and by applying the same estimation methods, obtain identical results
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Estimating the model: A latent curve model vs. a multilevel model
Using Mplus to take the latent curve model approach and SAS PROC MIXED (or R) to take the multilevel model approach Fit a linear growth model to repeated measures of intellectual ability
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Latent Curve Model Approach
The intercept and slope are the latent variables Time (Age) is incorporated into the model as specific and constrained values of the factor loadings, all possibly unique to each person
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Factor loadings, specified as fixed, constrained to specific values
The means of ‘Int’ and ‘Slope’ relate to the population model The variances of ‘Int’ and ‘Slope’ relate to variation in the level and rate of change across individuals ‘Int’ and ‘Slope’ free to covary
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Data model: yi = Ληi + εi The factor loading matrix, Λ, reflects assumptions about the pattern of change in the response variable Each column is known as a ‘basis function’ For linear change, Λ has two columns The first is a column of ones to represent the intercept The second is a column with values equal to the times of measurement In our example, time is represented by the child’s ages at each assessment Λ = 1 5.58 7.83 10.58 17.17
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Data model: yi = Ληi + εi The factor, ηi, is unknown and varies across individuals For an individual, the elements that make up ηi represent different aspects of change in y For linear change, ηi contains two factors ηi = (η0i,η1i )' η0i is individual i’s intercept η1i is individual i’s slope The factors are weights, each linked to a basis function defined in the factor matrix
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Data model: yi = Ληi + εi According to the model
An observed score is modeled as a weighted linear combination of the basis functions plus residual Underlying trajectory for an individual is given by Ληi The residual is the difference between the observed scores and the individual’s underlying trajectory
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Estimation using Mplus
Obtain maximum likelihood estimates of model parameters Estimate Factors means Factor variances and their covariance A common variance of the time-specific residuals
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Setting up the data file
Using the latent variable model approach, set up the data file in wide format
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Save as ascii file; no header
Indicate missing data
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Mplus syntax for fitting a linear growth model
random effects The | symbol is used in conjunction with TYPE=RANDOM to name and define the random effects
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Mplus syntax for fitting a linear growth model
Specifying ‘maximum likelihood’ estimation – we have other options for estimation The model assumes that the variances of the residuals are constant across time “(1)” will constrain the residual variances to be equal
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Results from Mplus
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Fitting the model using a multilevel model approach
Using SAS PROC MIXED Using the same estimator as was used in Mplus (maximum likelihood) PROC MIXED requires data in long-format
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Data file in wide format
Data for the first child (famid = 1) Data for the 2nd child (famid = 2)
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Bring data into SAS
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PROC MIXED syntax for fitting a linear growth model with random coefficients
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Results from SAS PROC MIXED
Fixed Intercept and Slope Variance of the random intercept Covariance between the random intercept and slope Variance of the random slope
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Mplus and PROC MIXED comparison
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Missing Data Missing data are often encountered in longitudinal panel studies Participants may miss one or more of the planned assessments, including those who drop from a study and do not return
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Intelligence test scores Only 16% of cases have complete data for all 4 waves
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How latent curve models and multilevel models handle missing data
Even though many participants have incomplete data for the 4 waves, all participants are included in the analysis Due to the method of estimation Maximum likelihood Does not require complete data for the response variable
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In the intelligence study, scores are studied according to Age that differs between children
For children who have complete data for all 4 waves, Λ is composed of 4 rows, 2 columns, ages are unique to the child For children who have data for waves 1-3 but not 4, Λ is composed of 3 rows, 2 columns, ages are unique to the child 1 5.58 7.83 10.58 17.17 1 2.33 5.17 11.42
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Due to the way in which the parameters of the models are estimated, missing response data (e.g., intelligence test scores) are handled This is different from other statistical methods, such as ANOVA, that require complete data for all cases for estimation
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Assumptions about missing data
For complete-case methods (e.g., ANOVA), data are assumed to be missing completely at random (MCAR) MCAR = whether data are missing or not is independent of the missing data as well as any observed data For available-case methods (e.g., latent curve models) data are assumed to be missing at random (MAR) MAR = whether data are missing or not is independent of the missing values; possibly related to any observed data
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Back to our example Linear growth is one possible model to describe test scores Can we improve on model fit by considering a nonlinear form of change, such as by applying a quadratic growth model?
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Interpretation Age is centered at 5 years Intercept Linear slope
Quadratic slope
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Slight modification of the Mplus syntax
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Quadratic Growth Model - Results
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Comparison of Model Fit
Linear Growth Quadratic Growth
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For nested models, we can use the likelihood ratio test to compare fit
Calculate the deviance for each model Deviance = -2*loglikelihood Statistic: chi-square = difference in deviances Linear growth: deviance = -2*( ) = Quadratic growth: deviance = -2*( ) = Chi-square = = df = difference in degrees of freedom between models df = 4 Chi-square of with 4 df, p < .0001
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Accounting for between-person differences in the random effects
Mother’s IQ test score Repeated measures of child test score
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Mplus syntax for a conditional growth model
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Conditional Growth Model - Results
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Conditional Growth Model - Results
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Other structures are possible
One more model: Evaluate our assumptions about the within-subject residuals Typical assumption Residuals are independent with constant variance across time Other structures are possible Autocorrelation Independent with heterogeneous variances across time
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Allow for autocorrelation between adjacent residuals
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Results
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Just an introduction to latent curve models
As a framework for the analysis of longitudinal panel data, these models offer many possibilities Are there any benefits to a latent curve model approach versus multilevel? Yes!
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Resources Duncan, T. E., Duncan, S. C., & Strycker, L. A. (2006). An introduction to latent variable growth curve modeling: Concepts, issues, and application (2nd ed.). Mahwah, NJ: Lawrence Erlbaum Associates, Inc. Bollen, K. A., & Curran, P.J. (2006). Latent curve models: A structural equation perspective. Hoboken, NJ: Wiley. Singer, J. D. (1998). Using SAS PROC MIXED to fit multilevel models, hierarchical models, and individual growth models. Journal of Educational and Behavioral Statistics, 23, Singer, J. D., & Willett, J. B. (2003). Applied longitudinal data analysis: Modeling change and event occurrence. New York: Oxford University Press.
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