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Translation Dr. Kevin Ahern
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Central Dogma
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mRNA Structure Bacteria
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Universal Redundant Logical Punctuated 64 Codons 3 Stops 1 Start
Genetic Code Universal Redundant Logical Punctuated 64 Codons 3 Stops 1 Start 2 Unique for AA 59 Redundant
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Translation Steps
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Central Dogma Nucleus Cytoplasm Eukaryotes
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Translation
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Simple View of Translation
Stop Codon Start Codon
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Structure
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tRNAs - Translator Molecules
Amino Acid Attachment Point
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tRNAs - Translator Molecules
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Amino Acid Activation - Charging of tRNAs
Aminoacyl tRNA-synthetase Type 1 - AA on 2’ OH Type 2 - AA on 3’ OH
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“Charging” of tRNAs
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fMet Synthesis in Prokaryotes
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Wobble Base
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Wobble Base
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Small Ribosomal Subunit (30S Prokaryotes)
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Large Ribosomal Subunit (50S Prokaryotes)
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Structure 50S Ribosomal Subunit
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rRNAs
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Simple Overview
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Overview
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Prokaryotes - Shine-Dalgarno Sequence
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Shine-Dalgarno Sequence
16S rRNA Sequence
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Initiation
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Initiation
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Structure Protection Against Hydrolysis EF-Tu
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Elongation
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Elongation
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Termination
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Translation in Prokaryotes
1. Binding of mRNA by small subunit 2. Sliding to identify start codon (Shine-Dalgarno) 3. Base pairing of anticodon of initiator tRNA to AUG in mRNA (3 IFs) 4. Binding of large subunit 5. Entry of second tRNA into A-site (EF-Tu) 6. Peptide bond formation - peptide on tRNA in A-site 7. Translocation (requires GTP & EFG) 8. Exit of used tRNA, entry of new charged tRNA 9. Repeat 5-8 to STOP Codon 10. Entry of release factor with water
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Translation in Eukaryotes
Differences 1. mRNA structure 2. Ribosome sizes (60S & 40S) 3. rRNA sizes (extra rRNA) 4. No Shine-Dalgarno 5. No fMet
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Translation in Eukaryotes - Initiation
Kozak Sequences
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Eukaryotic Translation
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Elongation
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Eukaryotic Translation
Bonding to mRNA Premature Stopping of Translation Degradation of mRNA
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Membrane Proteins
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Structure
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Membrane Protein Synthesis
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