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Agar Media Corn and Tomato 2015 National Referee
AOSA/SCST 2016 Annual Meeting Melissa Phillips Monsanto Seed Technology Center Waterman, Illinois
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Purpose The purpose of the referee was to introduce Agar (plant culturing media) as a potential candidate for use in germination testing.
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Participants 24 Labs in total signed up to participate
20 labs to test corn 13 Labs to test tomato Data returned (August –September 2015) 14 Labs returned corn data 8 Labs returned tomato data
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2015 Protocol Corn and Tomato 3 samples labeled 1-3 & 4-6
Samples 1-3 tested using the in-house AOSA approved method and agar media Process was to be repeated 5-7 days later with samples 4-6 for repeatability and establish in lab variability Agar concentration to be used 0.6%-1%
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Corn 2015 Referee Corn: The mean germination was lower for Agar. The repeatability and reproducibility were also not as good as the current methods. The data plot illustrates the result of a few labs with extreme data.
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(Similar values for current and new methods are ideal)
2015 Referee Conclusion: Corn Repeatability (within the same lab) Crop Method Percent Germination fr2 Sr Corn Agar 92.54 1.71 34.32 Current 93.94 1.32 27.43 Statistics courtesy of Paul Cannon-Monsanto Repeatability is the closeness of the agreement between the results of the same measure and carried out in the same conditions. Sr- Standard Deviation (lower the number the less variability) fr2 –Reproducibility (> 1 is a sign of more variability than expected) (Similar values for current and new methods are ideal)
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(Similar values for current and new methods are ideal)
2015 Referee Conclusion: Corn Reproducibility (across multiple labs) Crop Method Percent Germination fr2 SR Corn Agar 92.54 0.92 2.52 Current 93.94 0.34 1.39 Statistics courtesy of Paul Cannon-Monsanto Reproducibility is the precision under reproducibility conditions, i.e. conditions where test results are obtained with the same method on identical test items in different laboratories with different operators using different equipment. SR- Standard Deviation (lower the number the less variability) fr2 - Reproducibility across labs (> 1 is a sign of more variability than expected) (Similar values for current and new methods are ideal)
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Study Conclusion 9 Months later…..
Referee data was not supportive of a rule proposal at the time Further research needed – especially regarding large rounds Continue research and optimization over the summer 9 Months later…..
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Corn Today 100 samples Further studies showed that the concentration of agar plays a factor on germination especially round corn seed. After several variations of methods and concentrations the best correlation between paper media (CCP) and agar was a higher concentration than previous thought.
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Conclusion: Tomato Repeatability (within the same lab)
2015 Referee Crop Method Percent Germination fr2 Sr Tomato Agar 89.60 1.79 40.88 Current 89.86 1.29 33.79 Statistics courtesy of Paul Cannon - Monsanto Repeatability is the closeness of the agreement between the results of the same measure and carried out in the same conditions. Sr- Standard Deviation (lower the number the less variability) fr2 –Reproducibility within a lab (> 1 is a sign of more variability than expected) (Similar values for current and new methods are ideal)
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Tomato 2015 Referee
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Conclusion: Tomato Reproducibility (across multiple labs)
2015 Referee Crop Method Percent Germination fr2 SR Tomato Agar 89.60 0.24 1.50 Current 89.86 0.48 2.09 Statistics courtesy of Paul Cannon-Monsanto The reproducibility is the precision under reproducibility conditions, i.e. conditions where test results are obtained with the same method on identical test items in different laboratories with different operators using different equipment. fR2 –Reproducibility (> 1 is a sign of more variability than expected) SR- The average of the variance of results across all labs (similar number to the other method is desired.) The mean germination, repeatability, and reproducibility are all comparable for the agar and current methods.
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Tomato Referee 2016 5 labs 6 samples Agar vs. Current Method
Conclusion: Tomato on agar has consistently shown equivalency when compared to the current approved media (top of paper & rolled towel) in 2 large referees and 1 small over 2 years and many laboratories.
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Moving Forward Proposals 12 & 13 Seed Issues Forum
Agar as a media & Tomato on agar Seed Issues Forum Live Seedlings! Sign up for future referees
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Special Thanks AgReliant Genetics Dow Agrosciences Monsanto Company
for their support by donating seed for the project
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Special Thanks to Participants
AgReliant Agri Seed Testing* Alforex Seeds California Dept Food & Ag California Seed & Plant Lab Dow Agrosciences Eurofins BDI Florida Dept of Ag Georgia Dept Ag Growmark H M Clause Illinois Crop Improvement Incotec Indiana Crop Improvement Kent Agri Lab Michigan Crop Improvement Monsanto NST Labs Ohio Seed Improvement Sakata Seed Sakata Seed PNW SGS Syngenta Syngenta Veg USDA Forestry* USDA- SRTD USDA/ ARS Plant Intro *Seedlings for meetings
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References Miles, S.R. (1963), Handbook of tolerances and measures of precision for seed testing. Proc. Int. Seed Test. Ass. 28 (3). Nijënstein, J.H. (2013). Revised method and ISTA method validation report for the germination of Lolium x bouceanum, L. multiflorum, L. perenne, Festuca filiformis, F. heterophylla, F. ovina, F.rubra, Poa nemoralis, P. palustris, P. pratensis. ISTA Method Validation Report. Method Validation Reports on Rules Proposals for the International Rules for Seed Testing 2014 Edition, 2013, 2-33.
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