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Introduction to glycobiology
Course Objectives Learn the basic language of glycobiology Monosaccharides (vertebrate) Glycans (oligosaccharide & glycoconjugate basic concepts) Learn basic glycan functions Glycans in glycoprotein activity, folding, trafficking O-GlcNAc-mediated regulation Glycolipids in membrane recognition & regulation Proteoglycans in the extracellular matrix Glycan binding proteins Learn the basic concepts of glycan biosynthesis Learn the basic tools of glycomics (analysis)
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Introduction to glycobiology
Date Day Lecture Faculty Mar 27 Mon Saccharides & The Glyco World Dr. R. Schnaar Mar 28 Tue Glycoproteins 1 Dr. N. Zachara Mar 29 Wed Glycoproteins 2 Mar 30 Thu O-GlcNAc Dr. G. Hart Mar 31 Fri Glycolipids and GPI anchors Apr 3 Hyaluronan and Proteoglycans Apr 4 Carbohydrate Engineering Dr. K. Yarema Apr 5 Protein-Glycan Recognition Apr 5* Glycan Binding Protein Functions Apr 6 Glycomics (Analytical Glycobiology) Apr 6* Glycans and Disease
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Introduction to glycobiology
Course co-directors: Ronald Schnaar Natasha Zachara Lecturers: Gerald Hart Kevin Yarema
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Introduction to glycobiology
Oxford University Press, 2011 Cold Spring Harbor Laboratory Press, Content freely available: NOTE: 3rd Edition release date June 2017
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What are: Glycobiology? Glycoscience? Glycomics?
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Glycobiology The study of the biological functions, structures, recognition and biosynthesis of glycans (sugar chains, saccharides) in the context of the biological scaffolds to which they are attached (e.g. glycolipids & glycoproteins).
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Glycoscience Glycobiology & Glycochemistry, including…
- Chemical synthesis Chemoenzymatic synthesis Metabolic engineering Glycomimetics Glycan conformation and structure Material Sciences Plant and bacterial polysaccharides
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Glycomics - Analytical glycosciences - Glycan bioinformatics
“Glycome” – The total complement of glycans in a cell or organism
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NOT Carbohydrates as food
Glycobiology is … NOT Carbohydrates as food “Carbohydrates in food are important sources of energy. Starch found in plant-derived food such as pasta ....” Berg, Tymoczko & Stryer (2006) Biochemistry, Sixth Edition, W.H. Freeman, New York
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Glycobiology is NOT “a” post-translational modification
Glycobiology is NOT “a” post-translational modification... it is thousands Combinatorial linkage position, orientation and branching provide the potential for thousands* of different glycan structures – functional diversity Glycans may be larger and more diverse than their (protein) carriers A glycan’s function can supersede that of its (protein) carrier 1-2% of the human genome is devoted to glycosylation Modified from faculty/hougland.html Cummings RD (2009) Molecular BioSystems 5, 1087 *Glycoproteins and glycolipids may contain ~3000 glycan determinants with an additional ~4000 theoretical petasaccharide sequeces in glycosaminoglycans
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Glycobiology is … NOT a “decoration”
Zolla-Pazner (2004) Nature Reviews Immunology 4, 199 Guillaume et al (2016) Cell 165:813
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CD59, a complement defense glycoprotein
Proteins typically fold inward, whereas glycans spread out in space 3 kDa N-linked glycan 20 kDa protein 1 kDa O-linked glycan “naked” CD59, Huang et al (2007) Acta Crystallographica 63, 714 1.5 kDa GPI anchor CD59, a complement defense glycoprotein Rudd et al (1997) J Biol Chem 272, 7229
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The mammalian cell surface ?
Martinez-Palomo, A., et al. Cancer Res. 29, , 1969 The “glycocalyx” revealed (glycans stained with ruthinium red) intracellular fibroblast extracellular lipid bilayer intracellular fibroblast extracellular lipid bilayer wiki/Plasma_membrane Krijnse Locker J. & Schmid S.L. PLoS Biol 11, e , 2013 “Every eukaryotic cell is covered with a dense and complex array of glycans.” … in fact… “Evolution has failed to generate a [single] living cell devoid of surface glycosylation” - A. Varki
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What if a MAJOR cell component was invisible by standard microscopy?
Light microscopy micrograph of Cryptococcus neoformans capsule delineated by India ink. The inner circle represents the fungal cell, with the wide outer circle being the capsule. Steenbergen et al. (2003) Microbes and Infection 5:667 Light microscopy micrograph of Cryptococcus neoformans Steenbergen et al. (2003) Microbes and Infection 5:667 Scanning electron microscopy of C. neoformans yeast cells. Van Duin et al. (2004) Antimicrobial Agents and Chemotherapy 48:2014
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Each prokaryote carries a surface glycan coat
Electron microscopic thin section of Escherichia coli K1 Amako et al. (1988) J Bacteriol 170:4960 Electron microscopic thin section of Klebsiella pneumoniae Amako et al. (1988) J Bacteriol 170:4960
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Tropical Forest Canopy
“Evolution has failed to generate a living cell devoid of surface glycosylation” - A. Varki Cohen & Varki (2010) OMICS 4:455
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Real image textbook image
The Cell Surface Real image textbook image lipid bilayer fibroblast intracellular Martinez-Palomo, A., et al. Cancer Res. 29, , 1969 Among their diverse functions, glycans … encode intermolecular and cell-cell recognition regulate the activities of proteins (enzymes, ion channels, receptors) Define biophysical space (large, hydrated)
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Glycobiology = Language*
*semiotics: the theory of signs and symbols Rosetta Stone, British Museum
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Saccharides Carbohydrates: The language of glycobiology
The glycosidic bond and glycan nomenclature Major vertebrate glycan classes
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Saccharides Carbohydrates: The language of glycobiology
The glycosidic bond and glycan nomenclature Major vertebrate glycan classes
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(CH2O)n = “carbo” “hydrate”
Carbohydrates – the building blocks of Glycobiology (CH2O)n = “carbo” “hydrate” Generalized Ketose Generalized Aldose
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glucose fructose
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Monosaccharide structural identity is all about stereochemistry
Generalized Aldose Monosaccharide structural identity is all about stereochemistry Enantiomers: mirror images of each other that are not superimposable. Diastereomers: stereoisomers that are not enantiomers.
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Fischer projection D-glyceraldehyde
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Enantiomers * * D-glyceraldehyde L-glyceraldehyde *
Highest numbered asymmetric carbon = reference carbon
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Diasteriomers * * * Highest numbered asymmetric carbon = reference carbon
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diasteriomers & enantiomers
Enantiomers & Diasteriomers * * carbons asymmetric carbons diaster- iomers diasteriomers & enantiomers 3 1 2 4 5 8 6 16 * * * Highest numbered asymmetric carbon = reference carbon
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Essentials of Glycobiology
* * epimers: differ at a single stereogenic center Essentials of Glycobiology Second Edition
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Monosaccharides equilibrate between open chain and ring forms
Monosaccharides equilibrate between open chain and ring forms. Two ring forms (anomeric configurations) are possible, α and β α-D-glucose β-D-glucose D-glucose Taylor & Drickamer (2011) Introduction to Glycobiology, 3rd edition
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Monosaccharide conformation – Chair configuations
Taylor & Drickamer (2006) Introduction to Glycobiology, 2nd edition
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Nearly all vertebrate glycans are built from only 9 sugars:
3 hexoses Glucose Mannose Galactose 2 N-acetylhexosamines N-acetylglucosamine N-acetylgalactosamine xylose glucuronic acid sialic acid L-fucose *all D configuation except fucose
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Seven eukaryotic sugars and their relationship to glucose
Taylor & Drickamer (2011) Introduction to Glycobiology, 3rd edition
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Two important terminal eukaryotic sugars
Taylor & Drickamer (2011) Introduction to Glycobiology, 3rd edition
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Glycan properties for molecular recognition and binding energy
Glucose Galactose Mannose Sialic Acid
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Saccharides Carbohydrates: The language of glycobiology
The glycosidic bond and glycan nomenclature Major vertebrate glycan classes
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Saccharides Carbohydrates: The language of glycobiology
The glycosidic bond and glycan nomenclature Major vertebrate glycan classes
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Glycosidic bonds link sugars together
(lactose) CCRC When a glycosidic bond is formed the anomeric configuration is “locked” Taylor & Drickamer (2011) Introduction to Glycobiology, 3rd edition
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Nomenclature: -Name the non-reducing (left-most) sugar (Gal) -Name the anomeric configuration (β) -Name the anomeric carbon number (1) -Name the substituted carbon number (4) -Name the substituted sugar (Glc) RESULT: Gal β1-4 Glc Taylor & Drickamer (2011) Introduction to Glycobiology, 3rd edition
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Nomenclature: Branches are placed in parentheses
NeuAc α2-3 Gal β1-4 (Fuc α1-3) GlcNAc
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Varki et al. (2009) Proteomics. 9:5398
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Oligosaccharides: Molecular diversity of glycans
Polypeptides Glycans Building blocks amino acids monosaccharides Number of different monomers 20 common 9 common Linkage sites per monomer 1 3-4 Possible linkage configurations 2 Possible homodimer structures 6-8 Linkage modes linear linear or branched
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Three different amino acids (Ala, Ser, Tyr) – 6 structures Ala-Ser-Tyr
Ala-Ser-Tyr Ala-Tyr-Ser Ser-Ala-Tyr Ser-Tyr-Ala Tyr-Ala-Ser Tyr-Ser-Ala Three different sugars (Glc, Gal, Man) – 1,056 structures …
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Man a1-4 Gal a1-3 Glc b1 Man a1-6 Gal a1-3 Glc b1
Gal a1-2 Glc a1-2 Man a1- Gal a1-3 Glc a1-6 Man b1- Gal a1-4 Man b1-4 Glc a1- Man a1-6 Glc a1-3 Gal a1- Man b1-2 Glc b1-2 Gal b1- Man b1-3 Gal b1-6 Glc a1- Glc b1-4 Man a1-4 Gal a1- Glc b1-6 Man b1-3 Gal b1- Glc a1-2 Gal a1-3 Man b1- Gal a1-6 (Glc b1-2) Man a1- Gal a1-2 (Man b1-6) Glc a1- Glc b1-4 (Man a1-3) Gal a1- Gal a1-3 Glc a1-2 Man a1- Gal a1-4 Glc a1-6 Man b1- Gal a1-6 Man b1-4 Glc a1- Man b1-2 Glc a1-3 Gal a1- Man b1-3 Glc b1-2 Gal b1- Man b1-4 Gal b1-6 Glc a1- Glc b1-6 Man a1-4 Gal a1- Glc a1-2 Man b1-4 Gal b1- Glc a1-3 Gal a1-3 Man b1- Gal a1-6 (Glc b1-3) Man a1- Gal a1-3 (Man b1-2) Glc a1- Glc b1-4 (Man a1-6) Gal a1- Gal a1-4 Glc a1-2 Man a1- Gal a1-6 Glc a1-6 Man b1- Gal b1-2 Man b1-4 Glc a1- Man b1-3 Glc a1-3 Gal a1- Man b1-4 Glc b1-2 Gal b1- Man b1-6 Gal b1-6 Glc a1- Glc a1-2 Man a1-6 Gal a1- Glc a1-3 Man b1-4 Gal b1- Glc a1-4 Gal a1-3 Man b1- Gal a1-6 (Glc b1-4) Man a1- Gal a1-3 (Man b1-4) Glc a1- Glc b1-6 (Man a1-2) Gal a1- Gal a1-6 Glc a1-2 Man a1- Gal b1-2 Glc a1-6 Man b1- Gal b1-3 Man b1-4 Glc a1- Man b1-4 Glc a1-3 Gal a1- Man b1-6 Glc b1-2 Gal b1- Man a1-2 Gal a1-2 Glc b1 Glc a1-3 Man a1-6 Gal a1- Glc a1-4 Man b1-4 Gal b1- Glc a1-6 Gal a1-3 Man b1- Gal b1-2 (Glc b1-3) Man a1- Gal a1-3 (Man b1-6) Glc a1- Glc b1-6 (Man a1-3) Gal a1- Gal b1-2 Glc a1-2 Man a1- Gal b1-3 Glc a1-6 Man b1- Gal b1-4 Man b1-4 Glc a1- Man b1-6 Glc a1-3 Gal a1- Man a1-2 Glc b1-3 Gal b1- Man a1-3 Gal a1-2 Glc b1 Glc a1-4 Man a1-6 Gal a1- Glc a1-6 Man b1-4 Gal b1- Glc b1-2 Gal a1-3 Man b1- Gal b1-2 (Glc b1-4) Man a1- Gal a1-4 (Man b1-2) Glc a1- Glc b1-6 (Man a1-4) Gal a1- Gal b1-3 Glc a1-2 Man a1- Gal b1-4 Glc a1-6 Man b1- Gal b1-6 Man b1-4 Glc a1- Man a1-2 Glc a1-4 Gal a1- Man a1-3 Glc b1-3 Gal b1- Man a1-4 Gal a1-2 Glc b1 Glc a1-6 Man a1-6 Gal a1- Glc b1-2 Man b1-4 Gal b1- Glc b1-3 Gal a1-3 Man b1- Gal b1-2 (Glc b1-6) Man a1- Gal a1-4 (Man b1-3) Glc a1- Glc a1-2 (Man b1-3) Gal a1- Gal b1-4 Glc a1-2 Man a1- Gal b1-6 Glc a1-6 Man b1- Gal a1-2 Man b1-6 Glc a1- Man a1-3 Glc a1-4 Gal a1- Man a1-4 Glc b1-3 Gal b1- Man a1-6 Gal a1-2 Glc b1 Glc b1-2 Man a1-6 Gal a1- Glc b1-3 Man b1-4 Gal b1- Glc b1-4 Gal a1-3 Man b1- Gal b1-3 (Glc b1-2) Man a1- Gal a1-4 (Man b1-6) Glc a1- Glc a1-2 (Man b1-4) Gal a1- Gal b1-6 Glc a1-2 Man a1- Gal a1-2 Glc b1-2 Man b1- Gal a1-3 Man b1-6 Glc a1- Man a1-4 Glc a1-4 Gal a1- Man a1-6 Glc b1-3 Gal b1- Man b1-2 Gal a1-2 Glc b1 Glc b1-3 Man a1-6 Gal a1- Glc b1-4 Man b1-4 Gal b1- Glc b1-6 Gal a1-3 Man b1- Gal b1-3 (Glc b1-4) Man a1- Gal a1-6 (Man b1-2) Glc a1- Glc a1-2 (Man b1-6) Gal a1- Gal a1-2 Glc a1-3 Man a1- Gal a1-3 Glc b1-2 Man b1- Gal a1-4 Man b1-6 Glc a1- Man a1-6 Glc a1-4 Gal a1- Man b1-2 Glc b1-3 Gal b1- Man b1-3 Gal a1-2 Glc b1 Glc b1-4 Man a1-6 Gal a1- Glc b1-6 Man b1-4 Gal b1- Glc a1-2 Gal a1-4 Man b1- Gal b1-3 (Glc b1-6) Man a1- Gal a1-6 (Man b1-3) Glc a1- Glc a1-3 (Man b1-2) Gal a1- Gal a1-3 Glc a1-3 Man a1- Gal a1-4 Glc b1-2 Man b1- Gal a1-6 Man b1-6 Glc a1- Man b1-2 Glc a1-4 Gal a1- Man b1-3 Glc b1-3 Gal b1- Man b1-4 Gal a1-2 Glc b1 Glc b1-6 Man a1-6 Gal a1- Glc a1-2 Man b1-6 Gal b1- Glc a1-3 Gal a1-4 Man b1- Gal b1-4 (Glc b1-2) Man a1- Gal a1-6 (Man b1-4) Glc a1- Glc a1-3 (Man b1-4) Gal a1- Gal a1-4 Glc a1-3 Man a1- Gal a1-6 Glc b1-2 Man b1- Gal b1-2 Man b1-6 Glc a1- Man b1-3 Glc a1-4 Gal a1- Man b1-4 Glc b1-3 Gal b1- Man b1-6 Gal a1-2 Glc b1 Glc a1-2 Man b1-2 Gal a1- Glc a1-3 Man b1-6 Gal b1- Glc a1-4 Gal a1-4 Man b1- Gal b1-4 (Glc b1-3) Man a1- Gal b1-2 (Man b1-3) Glc a1- Glc a1-3 (Man b1-6) Gal a1- Gal a1-6 Glc a1-3 Man a1- Gal b1-2 Glc b1-2 Man b1- Gal b1-3 Man b1-6 Glc a1- Man b1-4 Glc a1-4 Gal a1- Man b1-6 Glc b1-3 Gal b1- Man a1-2 Gal a1-3 Glc b1 Glc a1-3 Man b1-2 Gal a1- Glc a1-4 Man b1-6 Gal b1- Glc a1-6 Gal a1-4 Man b1- Gal b1-4 (Glc b1-6) Man a1- Gal b1-2 (Man b1-4) Glc a1- Glc a1-4 (Man b1-2) Gal a1- Gal b1-2 Glc a1-3 Man a1- Gal b1-3 Glc b1-2 Man b1- Gal b1-4 Man b1-6 Glc a1- Man b1-6 Glc a1-4 Gal a1- Man a1-2 Glc b1-4 Gal b1- Man a1-3 Gal a1-3 Glc b1 Glc a1-4 Man b1-2 Gal a1- Glc a1-6 Man b1-6 Gal b1- Glc b1-2 Gal a1-4 Man b1- Gal b1-6 (Glc b1-2) Man a1- Gal b1-2 (Man b1-6) Glc a1- Glc a1-4 (Man b1-3) Gal a1- Gal b1-3 Glc a1-3 Man a1- Gal b1-4 Glc b1-2 Man b1- Gal b1-6 Man b1-6 Glc a1- Man a1-2 Glc a1-6 Gal a1- Man a1-3 Glc b1-4 Gal b1- Man a1-4 Gal a1-3 Glc b1 Glc a1-6 Man b1-2 Gal a1- Glc b1-2 Man b1-6 Gal b1- Glc b1-3 Gal a1-4 Man b1- Gal b1-6 (Glc b1-3) Man a1- Gal b1-3 (Man b1-2) Glc a1- Glc a1-4 (Man b1-6) Gal a1- Gal b1-4 Glc a1-3 Man a1- Gal b1-6 Glc b1-2 Man b1- Gal a1-2 Man a1-2 Glc b1- Man a1-3 Glc a1-6 Gal a1- Man a1-4 Glc b1-4 Gal b1- Man a1-6 Gal a1-3 Glc b1 Glc b1-2 Man b1-2 Gal a1- Glc b1-3 Man b1-6 Gal b1- Glc b1-4 Gal a1-4 Man b1- Gal b1-6 (Glc b1-4) Man a1- Gal b1-3 (Man b1-4) Glc a1- Glc a1-6 (Man b1-2) Gal a1- Gal b1-6 Glc a1-3 Man a1- Gal a1-2 Glc b1-3 Man b1- Gal a1-3 Man a1-2 Glc b1- Man a1-4 Glc a1-6 Gal a1- Man a1-6 Glc b1-4 Gal b1- Man b1-2 Gal a1-3 Glc b1 Glc b1-3 Man b1-2 Gal a1- Glc b1-4 Man b1-6 Gal b1- Glc b1-6 Gal a1-4 Man b1- Gal a1-2 (Glc a1-3) Man b1- Gal b1-3 (Man b1-6) Glc a1- Glc a1-6 (Man b1-3) Gal a1- Gal a1-2 Glc a1-4 Man a1- Gal a1-3 Glc b1-3 Man b1- Gal a1-4 Man a1-2 Glc b1- Man a1-6 Glc a1-6 Gal a1- Man b1-2 Glc b1-4 Gal b1- Man b1-3 Gal a1-3 Glc b1 Glc b1-4 Man b1-2 Gal a1- Glc b1-6 Man b1-6 Gal b1- Glc a1-2 Gal a1-6 Man b1- Gal a1-2 (Glc a1-4) Man b1- Gal b1-4 (Man b1-2) Glc a1- Glc a1-6 (Man b1-4) Gal a1- Gal a1-3 Glc a1-4 Man a1- Gal a1-4 Glc b1-3 Man b1- Gal a1-6 Man a1-2 Glc b1- Man b1-2 Glc a1-6 Gal a1- Man b1-3 Glc b1-4 Gal b1- Man b1-4 Gal a1-3 Glc b1 Glc b1-6 Man b1-2 Gal a1- Glc a1-2 Gal a1-2 Man a1- Glc a1-3 Gal a1-6 Man b1- Gal a1-2 (Glc a1-6) Man b1- Gal b1-4 (Man b1-3) Glc a1- Glc b1-2 (Man b1-3) Gal a1- Gal a1-4 Glc a1-4 Man a1- Gal a1-6 Glc b1-3 Man b1- Gal b1-2 Man a1-2 Glc b1- Man b1-3 Glc a1-6 Gal a1- Man b1-4 Glc b1-4 Gal b1- Man b1-6 Gal a1-3 Glc b1 Glc a1-2 Man b1-3 Gal a1- Glc a1-3 Gal a1-2 Man a1- Glc a1-4 Gal a1-6 Man b1- Gal a1-3 (Glc a1-2) Man b1- Gal b1-4 (Man b1-6) Glc a1- Glc b1-2 (Man b1-4) Gal a1- Gal a1-6 Glc a1-4 Man a1- Gal b1-2 Glc b1-3 Man b1- Gal b1-3 Man a1-2 Glc b1- Man b1-4 Glc a1-6 Gal a1- Man b1-6 Glc b1-4 Gal b1- Man a1-2 Gal a1-4 Glc b1 Glc a1-3 Man b1-3 Gal a1- Glc a1-4 Gal a1-2 Man a1- Glc a1-6 Gal a1-6 Man b1- Gal a1-3 (Glc a1-4) Man b1- Gal b1-6 (Man b1-2) Glc a1- Glc b1-2 (Man b1-6) Gal a1- Gal b1-2 Glc a1-4 Man a1- Gal b1-3 Glc b1-3 Man b1- Gal b1-4 Man a1-2 Glc b1- Man b1-6 Glc a1-6 Gal a1- Man a1-2 Glc b1-6 Gal b1- Man a1-3 Gal a1-4 Glc b1 Glc a1-4 Man b1-3 Gal a1- Glc a1-6 Gal a1-2 Man a1- Glc b1-2 Gal a1-6 Man b1- Gal a1-3 (Glc a1-6) Man b1- Gal b1-6 (Man b1-3) Glc a1- Glc b1-3 (Man b1-2) Gal a1- Gal b1-3 Glc a1-4 Man a1- Gal b1-4 Glc b1-3 Man b1- Gal b1-6 Man a1-2 Glc b1- Man a1-2 Glc b1-2 Gal a1- Man a1-3 Glc b1-6 Gal b1- Man a1-4 Gal a1-4 Glc b1 Glc a1-6 Man b1-3 Gal a1- Glc b1-2 Gal a1-2 Man a1- Glc b1-3 Gal a1-6 Man b1- Gal a1-4 (Glc a1-2) Man b1- Gal b1-6 (Man b1-4) Glc a1- Glc b1-3 (Man b1-4) Gal a1- Gal b1-4 Glc a1-4 Man a1- Gal b1-6 Glc b1-3 Man b1- Gal a1-2 Man a1-3 Glc b1- Man a1-3 Glc b1-2 Gal a1- Man a1-4 Glc b1-6 Gal b1- Man a1-6 Gal a1-4 Glc b1 Glc b1-2 Man b1-3 Gal a1- Glc b1-3 Gal a1-2 Man a1- Glc b1-4 Gal a1-6 Man b1- Gal a1-4 (Glc a1-3) Man b1- Gal a1-2 (Man a1-3) Glc b1- Glc b1-3 (Man b1-6) Gal a1- Gal b1-6 Glc a1-4 Man a1- Gal a1-2 Glc b1-4 Man b1- Gal a1-3 Man a1-3 Glc b1- Man a1-4 Glc b1-2 Gal a1- Man a1-6 Glc b1-6 Gal b1- Man b1-2 Gal a1-4 Glc b1 Glc b1-3 Man b1-3 Gal a1- Glc b1-4 Gal a1-2 Man a1- Glc b1-6 Gal a1-6 Man b1- Gal a1-4 (Glc a1-6) Man b1- Gal a1-2 (Man a1-4) Glc b1- Glc b1-4 (Man b1-2) Gal a1- Gal a1-2 Glc a1-6 Man a1- Gal a1-3 Glc b1-4 Man b1- Gal a1-4 Man a1-3 Glc b1- Man a1-6 Glc b1-2 Gal a1- Man b1-2 Glc b1-6 Gal b1- Man b1-3 Gal a1-4 Glc b1 Glc b1-4 Man b1-3 Gal a1- Glc b1-6 Gal a1-2 Man a1- Glc a1-2 Gal b1-2 Man b1- Gal a1-6 (Glc a1-2) Man b1- Gal a1-2 (Man a1-6) Glc b1- Glc b1-4 (Man b1-3) Gal a1- Gal a1-3 Glc a1-6 Man a1- Gal a1-4 Glc b1-4 Man b1- Gal a1-6 Man a1-3 Glc b1- Man b1-2 Glc b1-2 Gal a1- Man b1-3 Glc b1-6 Gal b1- Man b1-4 Gal a1-4 Glc b1 Glc b1-6 Man b1-3 Gal a1- Glc a1-2 Gal a1-3 Man a1- Glc a1-3 Gal b1-2 Man b1- Gal a1-6 (Glc a1-3) Man b1- Gal a1-3 (Man a1-2) Glc b1- Glc b1-4 (Man b1-6) Gal a1- Gal a1-4 Glc a1-6 Man a1- Gal a1-6 Glc b1-4 Man b1- Gal b1-2 Man a1-3 Glc b1- Man b1-3 Glc b1-2 Gal a1- Man b1-4 Glc b1-6 Gal b1- Man b1-6 Gal a1-4 Glc b1 Glc a1-2 Man b1-4 Gal a1- Glc a1-3 Gal a1-3 Man a1- Glc a1-4 Gal b1-2 Man b1- Gal a1-6 (Glc a1-4) Man b1- Gal a1-3 (Man a1-4) Glc b1- Glc b1-6 (Man b1-2) Gal a1- Gal a1-6 Glc a1-6 Man a1- Gal b1-2 Glc b1-4 Man b1- Gal b1-3 Man a1-3 Glc b1- Man b1-4 Glc b1-2 Gal a1- Man b1-6 Glc b1-6 Gal b1- Man a1-2 Gal a1-6 Glc b1 Glc a1-3 Man b1-4 Gal a1- Glc a1-4 Gal a1-3 Man a1- Glc a1-6 Gal b1-2 Man b1- Gal b1-2 (Glc a1-3) Man b1- Gal a1-3 (Man a1-6) Glc b1- Glc b1-6 (Man b1-3) Gal a1- Gal b1-2 Glc a1-6 Man a1- Gal b1-3 Glc b1-4 Man b1- Gal b1-4 Man a1-3 Glc b1- Man b1-6 Glc b1-2 Gal a1- Man a1-2 Gal a1-2 Glc a1- Man a1-3 Gal a1-6 Glc b1 Glc a1-4 Man b1-4 Gal a1- Glc a1-6 Gal a1-3 Man a1- Glc b1-2 Gal b1-2 Man b1- Gal b1-2 (Glc a1-4) Man b1- Gal a1-4 (Man a1-2) Glc b1- Glc b1-6 (Man b1-4) Gal a1- Gal b1-3 Glc a1-6 Man a1- Gal b1-4 Glc b1-4 Man b1- Gal b1-6 Man a1-3 Glc b1- Man a1-2 Glc b1-3 Gal a1- Man a1-3 Gal a1-2 Glc a1- Man a1-4 Gal a1-6 Glc b1 Glc a1-6 Man b1-4 Gal a1- Glc b1-2 Gal a1-3 Man a1- Glc b1-3 Gal b1-2 Man b1- Gal b1-2 (Glc a1-6) Man b1- Gal a1-4 (Man a1-3) Glc b1- Glc a1-2 (Man a1-3) Gal b1- Gal b1-4 Glc a1-6 Man a1- Gal b1-6 Glc b1-4 Man b1- Gal a1-2 Man a1-4 Glc b1- Man a1-3 Glc b1-3 Gal a1- Man a1-4 Gal a1-2 Glc a1- Man a1-6 Gal a1-6 Glc b1 Glc b1-2 Man b1-4 Gal a1- Glc b1-3 Gal a1-3 Man a1- Glc b1-4 Gal b1-2 Man b1- Gal b1-3 (Glc a1-2) Man b1- Gal a1-4 (Man a1-6) Glc b1- Glc a1-2 (Man a1-4) Gal b1- Gal b1-6 Glc a1-6 Man a1- Gal a1-2 Glc b1-6 Man b1- Gal a1-3 Man a1-4 Glc b1- Man a1-4 Glc b1-3 Gal a1- Man a1-6 Gal a1-2 Glc a1- Man b1-2 Gal a1-6 Glc b1 Glc b1-3 Man b1-4 Gal a1- Glc b1-4 Gal a1-3 Man a1- Glc b1-6 Gal b1-2 Man b1- Gal b1-3 (Glc a1-4) Man b1- Gal a1-6 (Man a1-2) Glc b1- Glc a1-2 (Man a1-6) Gal b1- Gal a1-2 Glc b1-2 Man a1- Gal a1-3 Glc b1-6 Man b1- Gal a1-4 Man a1-4 Glc b1- Man a1-6 Glc b1-3 Gal a1- Man b1-2 Gal a1-2 Glc a1- Man b1-3 Gal a1-6 Glc b1 Glc b1-4 Man b1-4 Gal a1- Glc b1-6 Gal a1-3 Man a1- Glc a1-2 Gal b1-3 Man b1- Gal b1-3 (Glc a1-6) Man b1- Gal a1-6 (Man a1-3) Glc b1- Glc a1-3 (Man a1-2) Gal b1- Gal a1-3 Glc b1-2 Man a1- Gal a1-4 Glc b1-6 Man b1- Gal a1-6 Man a1-4 Glc b1- Man b1-2 Glc b1-3 Gal a1- Man b1-3 Gal a1-2 Glc a1- Man b1-4 Gal a1-6 Glc b1 Glc b1-6 Man b1-4 Gal a1- Glc a1-2 Gal a1-4 Man a1- Glc a1-3 Gal b1-3 Man b1- Gal b1-4 (Glc a1-2) Man b1- Gal a1-6 (Man a1-4) Glc b1- Glc a1-3 (Man a1-4) Gal b1- Gal a1-4 Glc b1-2 Man a1- Gal a1-6 Glc b1-6 Man b1- Gal b1-2 Man a1-4 Glc b1- Man b1-3 Glc b1-3 Gal a1- Man b1-4 Gal a1-2 Glc a1- Man b1-6 Gal a1-6 Glc b1 Glc a1-2 Man b1-6 Gal a1- Glc a1-3 Gal a1-4 Man a1- Glc a1-4 Gal b1-3 Man b1- Gal b1-4 (Glc a1-3) Man b1- Gal b1-2 (Man a1-3) Glc b1- Glc a1-3 (Man a1-6) Gal b1- Gal a1-6 Glc b1-2 Man a1- Gal b1-2 Glc b1-6 Man b1- Gal b1-3 Man a1-4 Glc b1- Man b1-4 Glc b1-3 Gal a1- Man b1-6 Gal a1-2 Glc a1- Man a1-2 Gal b1-2 Glc b1 Glc a1-3 Man b1-6 Gal a1- Glc a1-4 Gal a1-4 Man a1- Glc a1-6 Gal b1-3 Man b1- Gal b1-4 (Glc a1-6) Man b1- Gal b1-2 (Man a1-4) Glc b1- Glc a1-4 (Man a1-2) Gal b1- Gal b1-2 Glc b1-2 Man a1- Gal b1-3 Glc b1-6 Man b1- Gal b1-4 Man a1-4 Glc b1- Man b1-6 Glc b1-3 Gal a1- Man a1-2 Gal a1-3 Glc a1- Man a1-3 Gal b1-2 Glc b1 Glc a1-4 Man b1-6 Gal a1- Glc a1-6 Gal a1-4 Man a1- Glc b1-2 Gal b1-3 Man b1- Gal b1-6 (Glc a1-2) Man b1- Gal b1-2 (Man a1-6) Glc b1- Glc a1-4 (Man a1-3) Gal b1- Gal b1-3 Glc b1-2 Man a1- Gal b1-4 Glc b1-6 Man b1- Gal b1-6 Man a1-4 Glc b1- Man a1-2 Glc b1-4 Gal a1- Man a1-3 Gal a1-3 Glc a1- Man a1-4 Gal b1-2 Glc b1 Glc a1-6 Man b1-6 Gal a1- Glc b1-2 Gal a1-4 Man a1- Glc b1-3 Gal b1-3 Man b1- Gal b1-6 (Glc a1-3) Man b1- Gal b1-3 (Man a1-2) Glc b1- Glc a1-4 (Man a1-6) Gal b1- Gal b1-4 Glc b1-2 Man a1- Gal b1-6 Glc b1-6 Man b1- Gal a1-2 Man a1-6 Glc b1- Man a1-3 Glc b1-4 Gal a1- Man a1-4 Gal a1-3 Glc a1- Man a1-6 Gal b1-2 Glc b1 Glc b1-2 Man b1-6 Gal a1- Glc b1-3 Gal a1-4 Man a1- Glc b1-4 Gal b1-3 Man b1- Gal b1-6 (Glc a1-4) Man b1- Gal b1-3 (Man a1-4) Glc b1- Glc a1-6 (Man a1-2) Gal b1- Gal b1-6 Glc b1-2 Man a1- Gal a1-2 Man a1-2 Glc a1- Gal a1-3 Man a1-6 Glc b1- Man a1-4 Glc b1-4 Gal a1- Man a1-6 Gal a1-3 Glc a1- Man b1-2 Gal b1-2 Glc b1 Glc b1-3 Man b1-6 Gal a1- Glc b1-4 Gal a1-4 Man a1- Glc b1-6 Gal b1-3 Man b1- Gal a1-2 (Glc b1-3) Man b1- Gal b1-3 (Man a1-6) Glc b1- Glc a1-6 (Man a1-3) Gal b1- Gal a1-2 Glc b1-3 Man a1- Gal a1-3 Man a1-2 Glc a1- Gal a1-4 Man a1-6 Glc b1- Man a1-6 Glc b1-4 Gal a1- Man b1-2 Gal a1-3 Glc a1- Man b1-3 Gal b1-2 Glc b1 Glc b1-4 Man b1-6 Gal a1- Glc b1-6 Gal a1-4 Man a1- Glc a1-2 Gal b1-4 Man b1- Gal a1-2 (Glc b1-4) Man b1- Gal b1-4 (Man a1-2) Glc b1- Glc a1-6 (Man a1-4) Gal b1- Gal a1-3 Glc b1-3 Man a1- Gal a1-4 Man a1-2 Glc a1- Gal a1-6 Man a1-6 Glc b1- Man b1-2 Glc b1-4 Gal a1- Man b1-3 Gal a1-3 Glc a1- Man b1-4 Gal b1-2 Glc b1 Glc b1-6 Man b1-6 Gal a1- Glc a1-2 Gal a1-6 Man a1- Glc a1-3 Gal b1-4 Man b1- Gal a1-2 (Glc b1-6) Man b1- Gal b1-4 (Man a1-3) Glc b1- Glc b1-2 (Man a1-3) Gal b1- Gal a1-4 Glc b1-3 Man a1- Gal a1-6 Man a1-2 Glc a1- Gal b1-2 Man a1-6 Glc b1- Man b1-3 Glc b1-4 Gal a1- Man b1-4 Gal a1-3 Glc a1- Man b1-6 Gal b1-2 Glc b1 Glc a1-2 Man a1-2 Gal b1- Glc a1-3 Gal a1-6 Man a1- Glc a1-4 Gal b1-4 Man b1- Gal a1-3 (Glc b1-2) Man b1- Gal b1-4 (Man a1-6) Glc b1- Glc b1-2 (Man a1-4) Gal b1- Gal a1-6 Glc b1-3 Man a1- Gal b1-2 Man a1-2 Glc a1- Gal b1-3 Man a1-6 Glc b1- Man b1-4 Glc b1-4 Gal a1- Man b1-6 Gal a1-3 Glc a1- Man a1-2 Gal b1-3 Glc b1 Glc a1-3 Man a1-2 Gal b1- Glc a1-4 Gal a1-6 Man a1- Glc a1-6 Gal b1-4 Man b1- Gal a1-3 (Glc b1-4) Man b1- Gal b1-6 (Man a1-2) Glc b1- Glc b1-2 (Man a1-6) Gal b1- Gal b1-2 Glc b1-3 Man a1- Gal b1-3 Man a1-2 Glc a1- Gal b1-4 Man a1-6 Glc b1- Man b1-6 Glc b1-4 Gal a1- Man a1-2 Gal a1-4 Glc a1- Man a1-3 Gal b1-3 Glc b1 Glc a1-4 Man a1-2 Gal b1- Glc a1-6 Gal a1-6 Man a1- Glc b1-2 Gal b1-4 Man b1- Gal a1-3 (Glc b1-6) Man b1- Gal b1-6 (Man a1-3) Glc b1- Glc b1-3 (Man a1-2) Gal b1- Gal b1-3 Glc b1-3 Man a1- Gal b1-4 Man a1-2 Glc a1- Gal b1-6 Man a1-6 Glc b1- Man a1-2 Glc b1-6 Gal a1- Man a1-3 Gal a1-4 Glc a1- Man a1-4 Gal b1-3 Glc b1 Glc a1-6 Man a1-2 Gal b1- Glc b1-2 Gal a1-6 Man a1- Glc b1-3 Gal b1-4 Man b1- Gal a1-4 (Glc b1-2) Man b1- Gal b1-6 (Man a1-4) Glc b1- Glc b1-3 (Man a1-4) Gal b1- Gal b1-4 Glc b1-3 Man a1- Gal b1-6 Man a1-2 Glc a1- Gal a1-2 Man b1-2 Glc b1- Man a1-3 Glc b1-6 Gal a1- Man a1-4 Gal a1-4 Glc a1- Man a1-6 Gal b1-3 Glc b1 Glc b1-2 Man a1-2 Gal b1- Glc b1-3 Gal a1-6 Man a1- Glc b1-4 Gal b1-4 Man b1- Gal a1-4 (Glc b1-3) Man b1- Gal a1-2 (Man b1-3) Glc b1- Glc b1-3 (Man a1-6) Gal b1- Gal b1-6 Glc b1-3 Man a1- Gal a1-2 Man a1-3 Glc a1- Gal a1-3 Man b1-2 Glc b1- Man a1-4 Glc b1-6 Gal a1- Man a1-6 Gal a1-4 Glc a1- Man b1-2 Gal b1-3 Glc b1 Glc b1-3 Man a1-2 Gal b1- Glc b1-4 Gal a1-6 Man a1- Glc b1-6 Gal b1-4 Man b1- Gal a1-4 (Glc b1-6) Man b1- Gal a1-2 (Man b1-4) Glc b1- Glc b1-4 (Man a1-2) Gal b1- Gal a1-2 Glc b1-4 Man a1- Gal a1-3 Man a1-3 Glc a1- Gal a1-4 Man b1-2 Glc b1- Man a1-6 Glc b1-6 Gal a1- Man b1-2 Gal a1-4 Glc a1- Man b1-3 Gal b1-3 Glc b1 Glc b1-4 Man a1-2 Gal b1- Glc b1-6 Gal a1-6 Man a1- Glc a1-2 Gal b1-6 Man b1- Gal a1-6 (Glc b1-2) Man b1- Gal a1-2 (Man b1-6) Glc b1- Glc b1-4 (Man a1-3) Gal b1- Gal a1-3 Glc b1-4 Man a1- Gal a1-4 Man a1-3 Glc a1- Gal a1-6 Man b1-2 Glc b1- Man b1-2 Glc b1-6 Gal a1- Man b1-3 Gal a1-4 Glc a1- Man b1-4 Gal b1-3 Glc b1 Glc b1-6 Man a1-2 Gal b1- Glc a1-2 Gal b1-2 Man a1- Glc a1-3 Gal b1-6 Man b1- Gal a1-6 (Glc b1-3) Man b1- Gal a1-3 (Man b1-2) Glc b1- Glc b1-4 (Man a1-6) Gal b1- Gal a1-4 Glc b1-4 Man a1- Gal a1-6 Man a1-3 Glc a1- Gal b1-2 Man b1-2 Glc b1- Man b1-3 Glc b1-6 Gal a1- Man b1-4 Gal a1-4 Glc a1- Man b1-6 Gal b1-3 Glc b1 Glc a1-2 Man a1-3 Gal b1- Glc a1-3 Gal b1-2 Man a1- Glc a1-4 Gal b1-6 Man b1- Gal a1-6 (Glc b1-4) Man b1- Gal a1-3 (Man b1-4) Glc b1- Glc b1-6 (Man a1-2) Gal b1- Gal a1-6 Glc b1-4 Man a1- Gal b1-2 Man a1-3 Glc a1- Gal b1-3 Man b1-2 Glc b1- Man b1-4 Glc b1-6 Gal a1- Man b1-6 Gal a1-4 Glc a1- Man a1-2 Gal b1-4 Glc b1 Glc a1-3 Man a1-3 Gal b1- Glc a1-4 Gal b1-2 Man a1- Glc a1-6 Gal b1-6 Man b1- Gal b1-2 (Glc b1-3) Man b1- Gal a1-3 (Man b1-6) Glc b1- Glc b1-6 (Man a1-3) Gal b1- Gal b1-2 Glc b1-4 Man a1- Gal b1-3 Man a1-3 Glc a1- Gal b1-4 Man b1-2 Glc b1- Man b1-6 Glc b1-6 Gal a1- Man a1-2 Gal a1-6 Glc a1- Man a1-3 Gal b1-4 Glc b1 Glc a1-4 Man a1-3 Gal b1- Glc a1-6 Gal b1-2 Man a1- Glc b1-2 Gal b1-6 Man b1- Gal b1-2 (Glc b1-4) Man b1- Gal a1-4 (Man b1-2) Glc b1- Glc b1-6 (Man a1-4) Gal b1- Gal b1-3 Glc b1-4 Man a1- Gal b1-4 Man a1-3 Glc a1- Gal b1-6 Man b1-2 Glc b1- Man a1-2 Glc a1-2 Gal b1- Man a1-3 Gal a1-6 Glc a1- Man a1-4 Gal b1-4 Glc b1 Glc a1-6 Man a1-3 Gal b1- Glc b1-2 Gal b1-2 Man a1- Glc b1-3 Gal b1-6 Man b1- Gal b1-2 (Glc b1-6) Man b1- Gal a1-4 (Man b1-3) Glc b1- Glc a1-2 (Man b1-3) Gal b1- Gal b1-4 Glc b1-4 Man a1- Gal b1-6 Man a1-3 Glc a1- Gal a1-2 Man b1-3 Glc b1- Man a1-3 Glc a1-2 Gal b1- Man a1-4 Gal a1-6 Glc a1- Man a1-6 Gal b1-4 Glc b1 Glc b1-2 Man a1-3 Gal b1- Glc b1-3 Gal b1-2 Man a1- Glc b1-4 Gal b1-6 Man b1- Gal b1-3 (Glc b1-2) Man b1- Gal a1-4 (Man b1-6) Glc b1- Glc a1-2 (Man b1-4) Gal b1- Gal b1-6 Glc b1-4 Man a1- Gal a1-2 Man a1-4 Glc a1- Gal a1-3 Man b1-3 Glc b1- Man a1-4 Glc a1-2 Gal b1- Man a1-6 Gal a1-6 Glc a1- Man b1-2 Gal b1-4 Glc b1 Glc b1-3 Man a1-3 Gal b1- Glc b1-4 Gal b1-2 Man a1- Glc b1-6 Gal b1-6 Man b1- Gal b1-3 (Glc b1-4) Man b1- Gal a1-6 (Man b1-2) Glc b1- Glc a1-2 (Man b1-6) Gal b1- Gal a1-2 Glc b1-6 Man a1- Gal a1-3 Man a1-4 Glc a1- Gal a1-4 Man b1-3 Glc b1- Man a1-6 Glc a1-2 Gal b1- Man b1-2 Gal a1-6 Glc a1- Man b1-3 Gal b1-4 Glc b1 Glc b1-4 Man a1-3 Gal b1- Glc b1-6 Gal b1-2 Man a1- Gal a1-2 (Glc a1-3) Man a1- Gal b1-3 (Glc b1-6) Man b1- Gal a1-6 (Man b1-3) Glc b1- Glc a1-3 (Man b1-2) Gal b1- Gal a1-3 Glc b1-6 Man a1- Gal a1-4 Man a1-4 Glc a1- Gal a1-6 Man b1-3 Glc b1- Man b1-2 Glc a1-2 Gal b1- Man b1-3 Gal a1-6 Glc a1- Man b1-4 Gal b1-4 Glc b1 Glc b1-6 Man a1-3 Gal b1- Glc a1-2 Gal b1-3 Man a1- Gal a1-2 (Glc a1-4) Man a1- Gal b1-4 (Glc b1-2) Man b1- Gal a1-6 (Man b1-4) Glc b1- Glc a1-3 (Man b1-4) Gal b1- Gal a1-4 Glc b1-6 Man a1- Gal a1-6 Man a1-4 Glc a1- Gal b1-2 Man b1-3 Glc b1- Man b1-3 Glc a1-2 Gal b1- Man b1-4 Gal a1-6 Glc a1- Man b1-6 Gal b1-4 Glc b1 Glc a1-2 Man a1-4 Gal b1- Glc a1-3 Gal b1-3 Man a1- Gal a1-2 (Glc a1-6) Man a1- Gal b1-4 (Glc b1-3) Man b1- Gal b1-2 (Man b1-3) Glc b1- Glc a1-3 (Man b1-6) Gal b1- Gal a1-6 Glc b1-6 Man a1- Gal b1-2 Man a1-4 Glc a1- Gal b1-3 Man b1-3 Glc b1- Man b1-4 Glc a1-2 Gal b1- Man b1-6 Gal a1-6 Glc a1- Man a1-2 Gal b1-6 Glc b1 Glc a1-3 Man a1-4 Gal b1- Glc a1-4 Gal b1-3 Man a1- Gal a1-3 (Glc a1-2) Man a1- Gal b1-4 (Glc b1-6) Man b1- Gal b1-2 (Man b1-4) Glc b1- Glc a1-4 (Man b1-2) Gal b1- Gal b1-2 Glc b1-6 Man a1- Gal b1-3 Man a1-4 Glc a1- Gal b1-4 Man b1-3 Glc b1- Man b1-6 Glc a1-2 Gal b1- Man a1-2 Gal b1-2 Glc a1- Man a1-3 Gal b1-6 Glc b1 Glc a1-4 Man a1-4 Gal b1- Glc a1-6 Gal b1-3 Man a1- Gal a1-3 (Glc a1-4) Man a1- Gal b1-6 (Glc b1-2) Man b1- Gal b1-2 (Man b1-6) Glc b1- Glc a1-4 (Man b1-3) Gal b1- Gal b1-3 Glc b1-6 Man a1- Gal b1-4 Man a1-4 Glc a1- Gal b1-6 Man b1-3 Glc b1- Man a1-2 Glc a1-3 Gal b1- Man a1-3 Gal b1-2 Glc a1- Man a1-4 Gal b1-6 Glc b1 Glc a1-6 Man a1-4 Gal b1- Glc b1-2 Gal b1-3 Man a1- Gal a1-3 (Glc a1-6) Man a1- Gal b1-6 (Glc b1-3) Man b1- Gal b1-3 (Man b1-2) Glc b1- Glc a1-4 (Man b1-6) Gal b1- Gal b1-4 Glc b1-6 Man a1- Gal b1-6 Man a1-4 Glc a1- Gal a1-2 Man b1-4 Glc b1- Man a1-3 Glc a1-3 Gal b1- Man a1-4 Gal b1-2 Glc a1- Man a1-6 Gal b1-6 Glc b1 Glc b1-2 Man a1-4 Gal b1- Glc b1-3 Gal b1-3 Man a1- Gal a1-4 (Glc a1-2) Man a1- Gal b1-6 (Glc b1-4) Man b1- Gal b1-3 (Man b1-4) Glc b1- Glc a1-6 (Man b1-2) Gal b1- Gal b1-6 Glc b1-6 Man a1- Gal a1-2 Man a1-6 Glc a1- Gal a1-3 Man b1-4 Glc b1- Man a1-4 Glc a1-3 Gal b1- Man a1-6 Gal b1-2 Glc a1- Man b1-2 Gal b1-6 Glc b1 Glc b1-3 Man a1-4 Gal b1- Glc b1-4 Gal b1-3 Man a1- Gal a1-4 (Glc a1-3) Man a1- Gal a1-2 (Man a1-3) Glc a1- Gal b1-3 (Man b1-6) Glc b1- Glc a1-6 (Man b1-3) Gal b1- Gal a1-2 Glc a1-2 Man b1- Gal a1-3 Man a1-6 Glc a1- Gal a1-4 Man b1-4 Glc b1- Man a1-6 Glc a1-3 Gal b1- Man b1-2 Gal b1-2 Glc a1- Man b1-3 Gal b1-6 Glc b1 Glc b1-4 Man a1-4 Gal b1- Glc b1-6 Gal b1-3 Man a1- Gal a1-4 (Glc a1-6) Man a1- Gal a1-2 (Man a1-4) Glc a1- Gal b1-4 (Man b1-2) Glc b1- Glc a1-6 (Man b1-4) Gal b1- Gal a1-3 Glc a1-2 Man b1- Gal a1-4 Man a1-6 Glc a1- Gal a1-6 Man b1-4 Glc b1- Man b1-2 Glc a1-3 Gal b1- Man b1-3 Gal b1-2 Glc a1- Man b1-4 Gal b1-6 Glc b1 Glc b1-6 Man a1-4 Gal b1- Glc a1-2 Gal b1-4 Man a1- Gal a1-6 (Glc a1-2) Man a1- Gal a1-2 (Man a1-6) Glc a1- Gal b1-4 (Man b1-3) Glc b1- Glc b1-2 (Man b1-3) Gal b1- Gal a1-4 Glc a1-2 Man b1- Gal a1-6 Man a1-6 Glc a1- Gal b1-2 Man b1-4 Glc b1- Man b1-3 Glc a1-3 Gal b1- Man b1-4 Gal b1-2 Glc a1- Man b1-6 Gal b1-6 Glc b1 Glc a1-2 Man a1-6 Gal b1- Glc a1-3 Gal b1-4 Man a1- Gal a1-6 (Glc a1-3) Man a1- Gal a1-3 (Man a1-2) Glc a1- Gal b1-4 (Man b1-6) Glc b1- Glc b1-2 (Man b1-4) Gal b1- Gal a1-6 Glc a1-2 Man b1- Gal b1-2 Man a1-6 Glc a1- Gal b1-3 Man b1-4 Glc b1- Man b1-4 Glc a1-3 Gal b1- Man b1-6 Gal b1-2 Glc a1- Glc a1-2 Man a1-2 Gal a1- Glc a1-3 Man a1-6 Gal b1- Glc a1-4 Gal b1-4 Man a1- Gal a1-6 (Glc a1-4) Man a1- Gal a1-3 (Man a1-4) Glc a1- Gal b1-6 (Man b1-2) Glc b1- Glc b1-2 (Man b1-6) Gal b1- Gal b1-2 Glc a1-2 Man b1- Gal b1-3 Man a1-6 Glc a1- Gal b1-4 Man b1-4 Glc b1- Man b1-6 Glc a1-3 Gal b1- Man a1-2 Gal b1-3 Glc a1- Glc a1-3 Man a1-2 Gal a1- Glc a1-4 Man a1-6 Gal b1- Glc a1-6 Gal b1-4 Man a1- Gal b1-2 (Glc a1-3) Man a1- Gal a1-3 (Man a1-6) Glc a1- Gal b1-6 (Man b1-3) Glc b1- Glc b1-3 (Man b1-2) Gal b1- Gal b1-3 Glc a1-2 Man b1- Gal b1-4 Man a1-6 Glc a1- Gal b1-6 Man b1-4 Glc b1- Man a1-2 Glc a1-4 Gal b1- Man a1-3 Gal b1-3 Glc a1- Glc a1-4 Man a1-2 Gal a1- Glc a1-6 Man a1-6 Gal b1- Glc b1-2 Gal b1-4 Man a1- Gal b1-2 (Glc a1-4) Man a1- Gal a1-4 (Man a1-2) Glc a1- Gal b1-6 (Man b1-4) Glc b1- Glc b1-3 (Man b1-4) Gal b1- Gal b1-4 Glc a1-2 Man b1- Gal b1-6 Man a1-6 Glc a1- Gal a1-2 Man b1-6 Glc b1- Man a1-3 Glc a1-4 Gal b1- Man a1-4 Gal b1-3 Glc a1- Glc a1-6 Man a1-2 Gal a1- Glc b1-2 Man a1-6 Gal b1- Glc b1-3 Gal b1-4 Man a1- Gal b1-2 (Glc a1-6) Man a1- Gal a1-4 (Man a1-3) Glc a1- Glc a1-2 (Man a1-3) Gal a1- Glc b1-3 (Man b1-6) Gal b1- Gal b1-6 Glc a1-2 Man b1- Gal a1-2 Man b1-2 Glc a1- Gal a1-3 Man b1-6 Glc b1- Man a1-4 Glc a1-4 Gal b1- Man a1-6 Gal b1-3 Glc a1- Glc b1-2 Man a1-2 Gal a1- Glc b1-3 Man a1-6 Gal b1- Glc b1-4 Gal b1-4 Man a1- Gal b1-3 (Glc a1-2) Man a1- Gal a1-4 (Man a1-6) Glc a1- Glc a1-2 (Man a1-4) Gal a1- Glc b1-4 (Man b1-2) Gal b1- Gal a1-2 Glc a1-3 Man b1- Gal a1-3 Man b1-2 Glc a1- Gal a1-4 Man b1-6 Glc b1- Man a1-6 Glc a1-4 Gal b1- Man b1-2 Gal b1-3 Glc a1- Glc b1-3 Man a1-2 Gal a1- Glc b1-4 Man a1-6 Gal b1- Glc b1-6 Gal b1-4 Man a1- Gal b1-3 (Glc a1-4) Man a1- Gal a1-6 (Man a1-2) Glc a1- Glc a1-2 (Man a1-6) Gal a1- Glc b1-4 (Man b1-3) Gal b1- Gal a1-3 Glc a1-3 Man b1- Gal a1-4 Man b1-2 Glc a1- Gal a1-6 Man b1-6 Glc b1- Man b1-2 Glc a1-4 Gal b1- Man b1-3 Gal b1-3 Glc a1- Glc b1-4 Man a1-2 Gal a1- Glc b1-6 Man a1-6 Gal b1- Glc a1-2 Gal b1-6 Man a1- Gal b1-3 (Glc a1-6) Man a1- Gal a1-6 (Man a1-3) Glc a1- Glc a1-3 (Man a1-2) Gal a1- Glc b1-4 (Man b1-6) Gal b1- Gal a1-4 Glc a1-3 Man b1- Gal a1-6 Man b1-2 Glc a1- Gal b1-2 Man b1-6 Glc b1- Man b1-3 Glc a1-4 Gal b1- Man b1-4 Gal b1-3 Glc a1- Glc b1-6 Man a1-2 Gal a1- Glc a1-2 Man b1-2 Gal b1- Glc a1-3 Gal b1-6 Man a1- Gal b1-4 (Glc a1-2) Man a1- Gal a1-6 (Man a1-4) Glc a1- Glc a1-3 (Man a1-4) Gal a1- Glc b1-6 (Man b1-2) Gal b1- Gal a1-6 Glc a1-3 Man b1- Gal b1-2 Man b1-2 Glc a1- Gal b1-3 Man b1-6 Glc b1- Man b1-4 Glc a1-4 Gal b1- Man b1-6 Gal b1-3 Glc a1- Glc a1-2 Man a1-3 Gal a1- Glc a1-3 Man b1-2 Gal b1- Glc a1-4 Gal b1-6 Man a1- Gal b1-4 (Glc a1-3) Man a1- Gal b1-2 (Man a1-3) Glc a1- Glc a1-3 (Man a1-6) Gal a1- Glc b1-6 (Man b1-3) Gal b1- Gal b1-2 Glc a1-3 Man b1- Gal b1-3 Man b1-2 Glc a1- Gal b1-4 Man b1-6 Glc b1- Man b1-6 Glc a1-4 Gal b1- Man a1-2 Gal b1-4 Glc a1- Glc a1-3 Man a1-3 Gal a1- Glc a1-4 Man b1-2 Gal b1- Glc a1-6 Gal b1-6 Man a1- Gal b1-4 (Glc a1-6) Man a1- Gal b1-2 (Man a1-4) Glc a1- Glc a1-4 (Man a1-2) Gal a1- Glc b1-6 (Man b1-4) Gal b1- Gal b1-3 Glc a1-3 Man b1- Gal b1-4 Man b1-2 Glc a1- Gal b1-6 Man b1-6 Glc b1- Man a1-2 Glc a1-6 Gal b1- Man a1-3 Gal b1-4 Glc a1- Glc a1-4 Man a1-3 Gal a1- Glc a1-6 Man b1-2 Gal b1- Glc b1-2 Gal b1-6 Man a1- Gal b1-6 (Glc a1-2) Man a1- Gal b1-2 (Man a1-6) Glc a1- Glc a1-4 (Man a1-3) Gal a1- Gal b1-4 Glc a1-3 Man b1- Gal b1-6 Man b1-2 Glc a1- Man a1-2 Glc a1-2 Gal a1- Man a1-3 Glc a1-6 Gal b1- Man a1-4 Gal b1-4 Glc a1- Glc a1-6 Man a1-3 Gal a1- Glc b1-2 Man b1-2 Gal b1- Glc b1-3 Gal b1-6 Man a1- Gal b1-6 (Glc a1-3) Man a1- Gal b1-3 (Man a1-2) Glc a1- Glc a1-4 (Man a1-6) Gal a1- Gal b1-6 Glc a1-3 Man b1- Gal a1-2 Man b1-3 Glc a1- Man a1-3 Glc a1-2 Gal a1- Man a1-4 Glc a1-6 Gal b1- Man a1-6 Gal b1-4 Glc a1- Glc b1-2 Man a1-3 Gal a1- Glc b1-3 Man b1-2 Gal b1- Glc b1-4 Gal b1-6 Man a1- Gal b1-6 (Glc a1-4) Man a1- Gal b1-3 (Man a1-4) Glc a1- Glc a1-6 (Man a1-2) Gal a1- Gal a1-2 Glc a1-4 Man b1- Gal a1-3 Man b1-3 Glc a1- Man a1-4 Glc a1-2 Gal a1- Man a1-6 Glc a1-6 Gal b1- Man b1-2 Gal b1-4 Glc a1- Glc b1-3 Man a1-3 Gal a1- Glc b1-4 Man b1-2 Gal b1- Glc b1-6 Gal b1-6 Man a1- Gal a1-2 (Glc b1-3) Man a1- Gal b1-3 (Man a1-6) Glc a1- Glc a1-6 (Man a1-3) Gal a1- Gal a1-3 Glc a1-4 Man b1- Gal a1-4 Man b1-3 Glc a1- Man a1-6 Glc a1-2 Gal a1- Man b1-2 Glc a1-6 Gal b1- Man b1-3 Gal b1-4 Glc a1- Glc b1-4 Man a1-3 Gal a1- Glc b1-6 Man b1-2 Gal b1- Glc a1-2 Gal a1-2 Man b1- Gal a1-2 (Glc b1-4) Man a1- Gal b1-4 (Man a1-2) Glc a1- Glc a1-6 (Man a1-4) Gal a1- Gal a1-4 Glc a1-4 Man b1- Gal a1-6 Man b1-3 Glc a1- Man b1-2 Glc a1-2 Gal a1- Man b1-3 Glc a1-6 Gal b1- Man b1-4 Gal b1-4 Glc a1- Glc b1-6 Man a1-3 Gal a1- Glc a1-2 Man b1-3 Gal b1- Glc a1-3 Gal a1-2 Man b1- Gal a1-2 (Glc b1-6) Man a1- Gal b1-4 (Man a1-3) Glc a1- Glc b1-2 (Man a1-3) Gal a1- Gal a1-6 Glc a1-4 Man b1- Gal b1-2 Man b1-3 Glc a1- Man b1-3 Glc a1-2 Gal a1- Man b1-4 Glc a1-6 Gal b1- Man b1-6 Gal b1-4 Glc a1- Glc a1-2 Man a1-4 Gal a1- Glc a1-3 Man b1-3 Gal b1- Glc a1-4 Gal a1-2 Man b1- Gal a1-3 (Glc b1-2) Man a1- Gal b1-4 (Man a1-6) Glc a1- Glc b1-2 (Man a1-4) Gal a1- Gal b1-2 Glc a1-4 Man b1- Gal b1-3 Man b1-3 Glc a1- Man b1-4 Glc a1-2 Gal a1- Man b1-6 Glc a1-6 Gal b1- Man a1-2 Gal b1-6 Glc a1- Glc a1-3 Man a1-4 Gal a1- Glc a1-4 Man b1-3 Gal b1- Glc a1-6 Gal a1-2 Man b1- Gal a1-3 (Glc b1-4) Man a1- Gal b1-6 (Man a1-2) Glc a1- Glc b1-2 (Man a1-6) Gal a1- Gal b1-3 Glc a1-4 Man b1- Gal b1-4 Man b1-3 Glc a1- Man b1-6 Glc a1-2 Gal a1- Man a1-2 Glc b1-2 Gal b1- Man a1-3 Gal b1-6 Glc a1- Glc a1-4 Man a1-4 Gal a1- Glc a1-6 Man b1-3 Gal b1- Glc b1-2 Gal a1-2 Man b1- Gal a1-3 (Glc b1-6) Man a1- Gal b1-6 (Man a1-3) Glc a1- Glc b1-3 (Man a1-2) Gal a1- Gal b1-4 Glc a1-4 Man b1- Gal b1-6 Man b1-3 Glc a1- Man a1-2 Glc a1-3 Gal a1- Man a1-3 Glc b1-2 Gal b1- Man a1-4 Gal b1-6 Glc a1- Glc a1-6 Man a1-4 Gal a1- Glc b1-2 Man b1-3 Gal b1- Glc b1-3 Gal a1-2 Man b1- Gal a1-4 (Glc b1-2) Man a1- Gal b1-6 (Man a1-4) Glc a1- Glc b1-3 (Man a1-4) Gal a1- Gal b1-6 Glc a1-4 Man b1- Gal a1-2 Man b1-4 Glc a1- Man a1-3 Glc a1-3 Gal a1- Man a1-4 Glc b1-2 Gal b1- Man a1-6 Gal b1-6 Glc a1- Glc b1-2 Man a1-4 Gal a1- Glc b1-3 Man b1-3 Gal b1- Glc b1-4 Gal a1-2 Man b1- Gal a1-4 (Glc b1-3) Man a1- Gal a1-2 (Man b1-3) Glc a1- Glc b1-3 (Man a1-6) Gal a1- Gal a1-2 Glc a1-6 Man b1- Gal a1-3 Man b1-4 Glc a1- Man a1-4 Glc a1-3 Gal a1- Man a1-6 Glc b1-2 Gal b1- Man b1-2 Gal b1-6 Glc a1- Glc b1-3 Man a1-4 Gal a1- Glc b1-4 Man b1-3 Gal b1- Glc b1-6 Gal a1-2 Man b1- Gal a1-4 (Glc b1-6) Man a1- Gal a1-2 (Man b1-4) Glc a1- Glc b1-4 (Man a1-2) Gal a1- Man a1-4 Gal a1-3 Glc b1 Man a1-6 Gal a1-3 Glc b1 Man b1-2 Gal a1-3 Glc b1 Man b1-3 Gal a1-3 Glc b1 Man b1-4 Gal a1-3 Glc b1 Man b1-6 Gal a1-3 Glc b1 Man a1-2 Gal a1-4 Glc b1 Man a1-3 Gal a1-4 Glc b1 Man a1-4 Gal a1-4 Glc b1 Man a1-6 Gal a1-4 Glc b1 Man b1-2 Gal a1-4 Glc b1 Man b1-3 Gal a1-4 Glc b1 Man b1-4 Gal a1-4 Glc b1 Man b1-6 Gal a1-4 Glc b1 Man a1-2 Gal a1-6 Glc b1 Man a1-3 Gal a1-6 Glc b1 Cummings RD (2009) Molecular BioSystems 5, 1087 *Glycoproteins and glycolipids may contain ~3000 glycan determinants with an additional ~4000 theoretical petasaccharide sequeces in glycosaminoglycans
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Saccharides Carbohydrates: The language of glycobiology
The glycosidic bond and glycan nomenclature Major vertebrate glycan classes
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Saccharides Carbohydrates: The language of glycobiology
The glycosidic bond and glycan nomenclature Major vertebrate glycan classes
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Major Glycans of Eukaryotes
Glycoproteins Glycolipids Proteoglycans
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Major Glycans of Eukaryotes
Glycoproteins Glycolipids Proteoglycans
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Glycoproteins N-Linked O-Linked GPI Anchor O-GlcNAc
*A non-inclusive list!
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Glycoproteins N-Linked O-Linked GPI Anchor O-GlcNAc
*A non-inclusive list!
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“N-linked” glycan linkage to protein asparagine residues
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Families of N-linked glycan structures
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Terminal Saccharide Diversity --- A key to recognition
Examples of structures found as termini on the branches of complex N-linked glycoprotein glycans…. NeuAc 2-6 Gal 1-4 GlcNAc--- NeuAc 2-3 Gal 1-4 GlcNAc--- Gal 1-3 Gal 1-4 GlcNAc--- 4-SO3-GalNAc 1-4 GlcNAc--- (-Gal 1-4 GlcNAc 1-3-)n = polylactosamine repeats (n may be >6) (-NeuAc 2-8-) n = polysialic acid (n may be >50) Fuc residues (e.g. Fuc 1-2 Gal; Fuc 1-3 GlcNAc; Fuc 1-4 GlcNAc
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Glycoproteins N-Linked O-Linked GPI Anchor O-GlcNAc
*A non-inclusive list!
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Glycoproteins N-Linked O-Linked GPI Anchor O-GlcNAc
*A non-inclusive list!
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“O-linked” glycan linkage to protein serine residues
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Examples of variations of O-linked glycans
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Glycoproteins N-Linked O-Linked GPI Anchor O-GlcNAc
*A non-inclusive list!
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Glycoproteins N-Linked O-Linked GPI Anchor O-GlcNAc
*A non-inclusive list!
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GPI (glycosylphosphatidylinositol) anchored protein
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CD59, a complement defense glycoprotein
3 kDa N-linked glycan 20 kDa protein 1 kDa O-linked glycan 1.5 kDa GPI anchor plasma membrane
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Glycoproteins N-Linked O-Linked GPI Anchor O-GlcNAc
*A non-inclusive list!
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Glycoproteins N-Linked O-Linked GPI Anchor O-GlcNAc
*A non-inclusive list!
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O-GlcNAc Note: No further sugar substitutions have been confirmed
Highly dynamic post-translational modification!
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Major Glycans of Eukaryotes
Glycoproteins Glycolipids Proteoglycans
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Major Glycans of Eukaryotes
Glycoproteins Glycolipids Proteoglycans
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Galactosylceramide (GalCer)
A Glycosphingolipid Galactosylceramide (GalCer)
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A Ganglioside “GD1a”
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Major Glycans of Eukaryotes
Glycoproteins Glycolipids Proteoglycans
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Major Glycans of Eukaryotes
Glycoproteins Glycolipids Proteoglycans
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Glycosaminoglycans (GAG’s) and Proteoglycans
long linear glycans made of repeating disaccharides Hyaluronic acid is the only “stand-alone” GAG, other GAG’s are constituents of … PROTEOGLYCANS GAG’s on proteins Defined by their repeating disaccharide units GAG’s on proteoglycans are sulfated
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Hyaluronic acid -- a “simple” space filling molecule
(GlcU β4 GlcNAc)n
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Post-polymerization variations in glycosaminoglycans
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Cartilage proteoglycan
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Cartilage proteoglycan
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Glycan Biosynthesis Glycosyltransferase reaction (UDP-Gal:glucose β4 galactosyltransferase) UDP-Glc UDP-Gal GDP-Man UDP-GlcNAc UDP-GalNAc UDP-GlcA UDP-Xyl GDP-Fuc CMP-NeuAc Activated Sugars:
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Glycoprotein biosynthesis
N-Linked – en-bloc preconstructed core, trimming, terminal elaboration O-Linked – stepwise sugar by sugar addition O-GlcNAc - dynamic transferase/glycosidase GPI Anchor – en-bloc preconstructed core, elaboration Glycolipid biosynthesis Stepwise sugar-by-sugar addition Proteoglycan biosynthesis Stepwise sugar-by-sugar addition (core and repeating disaccharide) Post-polymerization modifications
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Introduction to glycobiology
“What the matter, Sal, not up on your glycobiology? H Ford (2010) Extraordinary Measures, CBS Films, Los Angeles, CA, USA
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Harrison Ford and Brendon Fraser (2010) Extraordinary Measures
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Lysosomal storage diseases are often due to faulty glycan catabolism
Hurler (alpha-L iduronidase) Hunter (iduronate-2-sulfatase) I-cell (GlcNAc phosphotransferase)
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Lysosomal storage diseases can be studied using patient cells in culture
I-cell lyphocytes van der Meer et al (2001) J Clin Pathol 54:724 I-cell fibroblasts Hanai et al (1971) Am J Dis Child 122:34
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Fibroblasts from Hunter & Hurler patients build up glycosaminoglycans
Co-incubation with normal fibroblasts or each other corrects the buildup… Correction is via a soluble factor (direct contact not required). Fratantoni et al (1968) Science 162:170
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Corrective factor properties
Purified lysosomal hydrolases are taken up by fibroblasts – different enzymes correct storage of different diseases Periodate pre-treatment of lysosomal hydrolases (cleaves sugar C-C bonds) inhibited enzyme uptake Enzyme uptake was selectively blocked by mannose Enzyme uptake was blocked better mannose-6-phosphate Phosphatase pre-treatment of the enzyme blocked its uptake Fibroblasts do not take up I-cell lysosomal hydrolases Normal lysosomal hydrolases have mannose-6-phosphate residues (unusual!) on their N-linked glycans I-cell patients are deficient in addition of 6-linked phosphate to mannose on their N-linked glycans
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Lysosomal enzyme targeting
Dahms et al (1989) J Biol Chem 264:12115
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Discovery: A unique and specific modification of lysosomal hydrolases for their trafficking to lysosomes Bohnsack et al (2009) J Biol Chem 284:35215
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Sugar-modifying enzyme lacking in I-cell disease:
N-acetylglucosamine-1-phosphate transferase Reproducing this same Man-6-P modification on expressed therapeutic lysosomal hydrolases effectively targets them to the lysosome in vivo
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William Canfield and John Crowley, Novazyme (http://blog.newok.com)
H Ford and B Fraser (2010) Extraordinary Measures, CBS Films, Los Angeles, CA, USA
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Introduction to glycobiology
Date Day Lecture Faculty Mar 27 Mon Saccharides & The Glyco World Dr. R. Schnaar Mar 28 Tue Glycoproteins 1 Dr. N. Zachara Mar 29 Wed Glycoproteins 2 Mar 30 Thu O-GlcNAc Dr. G. Hart Mar 31 Fri Glycolipids and GPI anchors Apr 3 Hyaluronan and Proteoglycans Apr 4 Carbohydrate Engineering Dr. K. Yarema Apr 5 Protein-Glycan Recognition Apr 5* Glycan Binding Protein Functions Apr 6 Glycomics (Analytical Glycobiology) Apr 6* Glycans and Disease
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