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House spider genome uncovers evolutionary shifts in the diversity and expression of black widow venom proteins associated with extreme toxicity Gendreau.

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Presentation on theme: "House spider genome uncovers evolutionary shifts in the diversity and expression of black widow venom proteins associated with extreme toxicity Gendreau."— Presentation transcript:

1 House spider genome uncovers evolutionary shifts in the diversity and expression of black widow venom proteins associated with extreme toxicity Gendreau et al. 2017

2 Latrodectus (genus) Black widows and the Australian red-back
Every continent except Antarctica Potent venoms 20+ unique latrotoxins and latrodectins Extreme pain via neurotoxins Muscle spasms, paralysis, difficulty breathing Do not mess with black widows, let them do their thing Arnedo et al 2004, Michalik and Hormiga 2010

3 Rationale Why is their venom extremely potent? Medically important
Understanding the evolution with help with understanding toxicity Help figure out how venom genes are recruited How gene families expand Genetic basis of self-resistance

4 Venom Components Latrotoxins Latrodectins Neurotoxins
α-latrotoxin, α-latroinsectotoxin, δ-latroinsectotoxin, and α-lactrocrustotoxin Latrodectins Highly expressed Contribute to latrotoxin toxicity, but not toxic by themselves

5 Reference Genome Common house spider (Parasteatoda tepidariorum)
Common across the New World Latrodectus and Parasteatoda split ~90 Mya Genome Specs: 1.4 Gb Compared to L. Hesperus (western black widow) and Stegodyphus mimosarum (social velvet spider)

6 Methods Annotation of house spider genome with 454 and Illumina RNA-Seq data All tissues/whole bodies at various stages of development 2 RNA-Seq libraries of silk and venom glands (RNA transcripts) Illumina Hi-Seq 2000 with 100bp paired end reads (150+ million reads each) RSEM to quantify gene expression Mapped L. hesperus venom + silk gland, cephalothorax, and S. mimosarum venom RNA transcript reads to respective transcriptomes to ID those with high venom gland expression tBLASTn search Lhes latrotoxin proteins>translated>BLASTp against NCBI protein database

7 More Methods BLASTp search of Augustus predicted proteins of Ptep genomes to Translated Ptep latrotoxins (first 320 bp) Translated Latrodectus and Steatoda species latrotoxins (first 320 bp) C-terminal domains of Ptep latrotoxins Ptep latrodectin homologs Velvet spider genome for latrodectin and latrotoxin homologs Protein sequence alignments with CLUSTAL Omega Use to generate protein phylogenies

8 Results Identified 47 full-length latrotoxin coding genes in Ptep genome Latrotoxins vary greatly in structural domains and expression Significant functional diversification

9 Results Identified 47 full-length latrotoxin coding genes in Ptep genome Latrotoxins vary greatly in structural domains and expression Significant functional diversification Ptep latrotoxins share significant identity with D. massiliensis, a bacterial endosymbiont of ticks (lateral transfer)

10 Results Identified 47 full-length latrotoxin coding genes in Ptep genome Latrotoxins vary greatly in structural domains and expression Significant functional diversification Ptep latrotoxins share significant identity with D. massiliensis, a bacterial endosymbiont of ticks (lateral transfer) α-latrotoxin ortholog not found in Ptep genome Very different venom compositions

11 Conclusions The house spider has latrotoxin and latrodectin genes
Latrotoxins restricted to one spider family (Theridiidae) And possibly endosymbiotic bacteria (the assumed source) Lineage-specific gene family expansion, via gene duplication Latrodectins are derived from a neuropeptide hormone family CHH/ITP (Crustacean Hyperglycemic Hormone/Ion Transport Peptide) Major differences in composition of house spider and black widow venoms Widows have higher latrotoxin and latrodectin expression Widows have vertebrate specific α-latrotoxin (venom potency?)

12 Questions Are there standard cutoffs for what is determined to be tissue-specific or tissue-biased gene expression? Why is it so difficult to characterize proteins? They left 30-50% uncharacterized Are latrodectins inherently toxic or do they just act as enhancers? Is it possible to resolve how long ago the gene transfer event occurred if DNA reads AND RNA reads are used, and/or more spider species are analyzed? Or is the event too far in the past (assuming ~90 Mya) to expect clear results?


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