1. Automated analysıs of neuroımagıng data
Systems Biology for Translational Medicine
Prospective Project Partnership Meeting
Automated analysıs of neuroımagıng data
Devrim Ünay
Faculty of Engineering, Biomedical Engineering

2. Field of Study / Technical Experience
Keywords: Computer-aided diagnosis, Image processing, Medical information retrieval, Data mining, Machine learning
General Information: Algorithm development for automated analysis of medical data
Neuroimaging
Macro-scale – Analysis of MR/CT data
Micro-scale – Analysis of microscopy data
Information retrieval
Finding similar cases from large databases (Medical images + Patient demographics + Clinical information)

3. Projects
A new Network of European BioImage Analysts to advance life science imaging (NEUBIAS)
EU Cost Action CA15124 ( )
Probabilistic and Machine Learning-based Methods for Automatic Dendritic Spine Segmentation, Classification, and Tracking in Two-Photon Microscopy Images
TÜBİTAK ARDEB 1001 ( )
Comparing Visual and computer-based ratings of dementia-related neuroimaging findings
TÜBİTAK ARDEB 3501 Career Grant ( )
4D Modeling of the Human Heart for Pre-Surgical Planning
San-Tez, Ministry of Industry and Trade ( )
Content and Ontology based Search and Retrieval of Medical Images
EU FP7 Marie Curie ERG ( )

4. Project Idea / Contribution Fields
List of the fields you may participate and/or techniques you may offer:
Automatic or semi-automatic quantification of
MR/CT/PET biomarkers for neurodegenerative diseases
Neuron morphology from microscopy data
Similar case retrieval from large, distributed, multimodal databases
Applications of machine learning in the medical field

5. Contact Details Devrim Ünay
Faculty of Engineering, Biomedical Engineering
Web: