1. Sequence analysis Introduction
“Bioinformatics: Computer Methods in Molecular Biology”
June 26-30, 2017, Trieste, Italy
Sequence analysis
Introduction
Leonardo Mariño-Ramírez - Roberto Vera Alvarez
NCBI, NIH – Bethesda, USA

2. Course computer infrastructure
External resources
(remote HPC systems)
ICGEB Network
Google Cloud Platform
(Beowulf Virtual Cluster)
Technical University, Graz, Austria
User computers

3. ICGEB Network
It is a 100/1000 MB/s network connecting several physical/virtualized servers and more than 200 workstations (Macs and PCs)
The ICGEB LAN it is connected to Internet by Italian Academic Network GARR-X

4. ICGEB WLAN
ICGEB Computer Unit extended ICGEB Wireless LAN (WLAN) to this course room
Only two client wireless device, at a time, can be connected, the accounts provided should not be shared between different users

5. ICGEB WIRELESS CREDENTIALS

6. Google cloud infrastructure is provided by Pázmány Péter University, Budapest, Hungary

9. Thanks Roberto!
Roberto Vera Alvarez, NCBI

10. Cluster data & software
Global file system (Linux NFS):
/gfs/progs for Bioinformatics programs
/gfs/data for public and global data (databases)
/home/user# User's space (HOME)
Cluster Monitoring Tools
shows the users and jobs running
shows the cluster status

11. Let's get started! Click on “Course requirements”
net.icgeb.org/course/2017
Click on “Course requirements”
Follow the links to install all programs from the list

12. Have a nice course!!!!