1. « Enabled Knowledge Discovery » 7-8 june 2016
Collective Data:
« Enabled Knowledge Discovery »
7-8 june 2016
Amphi Pasteur – Tour CERVI
21 avenue Tony Garnier – Lyon
Agenda:
June 7th
June 8th
Presentation
Collective Data: A new engine for knowledge discovery.
Data notes
Overview of steps involved in:
Identification of relevant transcriptome datasets in GEO. Creation of a dataset compendium using GXB. Publication of data notes.
Lunch break
Comments and commentaries
Focus on a gene of interest, using the literature as a starting point.
Research notes or papers
Literature profiling. Knowledge gap assessment. In Silico validation. Extension of initial findings. Publication of research note or paper.
Literature review
Crafting effective Pubmed queries. Information extraction from the literature. How to generate dynamic literature profiles.
Lunch break
Discovery pipelines
Knoledge gap score. Prioritization of a gene list for discovery. Crowdsourcing. Information extraction. Information representation.
Limited to 30 participants. Registration is free but mandatory.
Speaker: Damien Chaussabel
Event Registration: by to
Open to: master degree students, post-doctoral fellow, research scientists. Participants must be comfortable with English and don’t forget to bring your laptop.