1. (r)evolutions in scholarly publishing
LISA VIII (Library and Information Services in Astronomy) conference
June 9th, 2017, Strasbourg
Presented by José Stoop

2. Changing times Changing times | Collaboration | Data | In conclusion

3. Changes to electronic era, access models, article interface, etc…
Changing times | Collaboration | Data | In Conclusion
Changes to electronic era, access models, article interface, etc…

4. Changes in researcher responsibilities
Changing times | Collaboration | Data | In Conclusion
Changes in researcher responsibilities
Researchers still spend 25% of their time reading journal content

5. Changing publisher services
Changing times | Collaboration | Data | In Conclusion
Changing publisher services

6. Platforms becoming decision support tools, built on content and data
Changing times | Collaboration | Data | In Conclusion
Platforms becoming decision support tools, built on content and data
Read
Search Do
this
this
this
Cell
Journals
Gray‘s Anatomy
ScienceDirect
Scopus
ClinicalKey®
Reaxys®
Sherpath
Mendeley
InferMed
Knovel®

7. Collaboration Changing times | Collaboration | Data | In conclusion

8. The dynamics of information exchange is changing
Changing times | Collaboration | Data | In Conclusion
The dynamics of information exchange is changing
Increasing choice of channels, each with different qualities
Social networking and sharing websites are playing an increasingly important role
research gate, open science, google scholar, authorea, preprint servers etc: sociale omgeving wordt steeds belangrijker. Workflows zijn heel anders gaan lopen, veel minder rechtlijnig dan voorheen. Verschilt ook heel erg per discipline (astronomy: arxiv, life sciences: OA). Toegevoegde waarde van publisher kan zijn om customized oplossingen te beiden als uitgever. Publisher kent nu eenmaal de community heel goed en heeft de tools.

9. Cross-publisher developments
Changing times | Collaboration | Data | In Conclusion
Cross-publisher developments
Mendeley Metrics/Stats/Groups
CiteScore (“basket of metrics” launch June 2017)
DataSearch
Pure / SciVal
ORCID
CrossRef
RDA

10. Mendeley Groups pilots – some examples
Changing times | Collaboration | Data | In Conclusion
Mendeley Groups pilots – some examples
Biomaterials Peer Review Debate Room (Private) – Training & support for junior/aspiring peer-reviewers
10 Tips for writing a truly terrible journal article (Public) – Q&A on effective article-writing
Data Citation Q&A (Public) – In-depth discussion about views and ideas on data citation

11. Data Changing times | Collaboration | Data | In conclusion

12. A Maslow Hierarchy for Research Data
Changing times | Collaboration | Data | In Conclusion
A Maslow Hierarchy for Research Data
10. Integrate upstream and downstream
– make metadata to serve use.
9. Re-usable (allow tools to run on it)
8. Reproducible
Use
7. Trusted (e.g. reviewed)
6. Comprehensible (description / method is available)
5. Citable
4. Discoverable (data is indexed or data is linked from article)
Share
3. Accessible
2. Preserved (long-term & format-independent)
Save
1. Stored (existing in some form)

13. Store, Access: Mendeley Data
Changing times | Collaboration | Data | In Conclusion
Store, Access: Mendeley Data
Linked to published papers – or not
Linked to Github – or not
Versioning and provenance tracking
Different Licenses: GNU-PL, CC-BY CC0, etc

14. Access, cite: Data-linking
Changing times | Collaboration | Data | In Conclusion
Access, cite: Data-linking
Integrated in paper submission process
Supplementary data is never behind a paywall
Closely integrated with > 150 databases:
Linking through in-article code / data accession numbers
Database banners shown next to the article on ScienceDirect

15. Changing times | Collaboration | Data | In Conclusion
Cite: Force11

16. Changing times | Collaboration | Data | In Conclusion
Discover: Datasearch
Chemistry data are retrievable from NIST, but only by going to their page in a browser and using their search tools. What about accessible within other applications, or accessible in assistive devices for those with vision impairment? What guarantee do we have the data will remain accessible in case of government funding problems?

17. Review: Research Elements
Changing times | Collaboration | Data | In Conclusion
Review: Research Elements
Brief article types designed to communicate a specific element of the research cycle
Complementary to full research papers
Easy to prepare and submit
Peer-reviewed and indexed
Receive a DOI and fully citable
Allow citable post-publication updates
Primarily Open Access (CC-BY)
Published in Multidisciplinary and domain-specific journals
Data
articles
Software articles
Method articles
Protocols
Video
Hardware articles
Lab resources
Full Research
paper

18. Reproduce: Guidelines and Reproducibility
Changing times | Collaboration | Data | In Conclusion
Reproduce: Guidelines and Reproducibility
Guidelines
STAR Methods (Cell Press) – structured, transparency, accessible, reporting
TOP Guidelines – encouraging authors to share data and submit data availability statement
Reproducibility of papers
Cortex registered reports - method and proposed analysis are submitted for pre-registration, paper is conditionally accepted, research is executed, full paper submitted, accepted provided that protocol is followed
Invited Reproducibility Papers – authors are invited to write a reproducibility paper from their original article, reviewers of this new paper also become co-authors (incentive)

19. Collaborations and Tools
Changing times | Collaboration | Data | In Conclusion
Collaborations and Tools
The Research Data Alliance (RDA) builds the social and technical bridges that enable open sharing of data
An Electronic Lab Notebook that helps prepare,
conduct and analyze experiments virtually
Links existing data archiving and sharing efforts together with a common set of tools
Search for research data across domains and repositories
A framework for exchanging information about links between literature and data
A secure cloud-based repository, making it easy to share, access and cite data
A community of scholars, librarians, and others that helps facilitate the change toward improved knowledge creation and sharing
Research Elements:
Publish data, software, materials and methods in brief, citable articles
A blueprint for cloud-based services and data infrastructure to ensure science, business and public services reap the benefits of the big data revolution
A service to support research librarians in tracking data sharing and use across campus

20. Summary Collaborative Efforts Elsevier Efforts
Changing times | Collaboration | Data | In Conclusion
Summary
Elsevier Efforts
Collaborative Efforts
10. Integrate upstream and downstream
– make metadata to serve use.
Reproducibility Initiatives
9. Re-usable
8. Reproducible
Use
7. Trusted
6. Comprehensible
Data Lighthouse
5. Citable
4. Discoverable
Share
3. Accessible
2. Preserved
Save
1. Stored

21. Our industry is changing
Changing times | Collaboration | Data | In Conclusion
Our industry is changing
In conclusion
Changing times | Collaboration | Data | In conclusion

22. Information Solutions Provider
Changing times | Collaboration | Data | In Conclusion
Publisher
Elsevier is a world-leading publisher of scientific, technical and medical information products and services
Elsevier is a global information analytics company specializing in science and health
Now
Information Solutions Provider

23. Questions? Thank you! J.stoop@elsevier.com
Changing times | Collaboration | Data | In Conclusion
Thank you!
Questions?

24. (Social Research Networks)
Our industry is changing
Online communities
(Social Research Networks)
Print to Electronic
Broadcast model
(OA models) … …

25. Open peer review Freely available Separate DOI
Changing times | Social embedding | Data Initiatives | Peer Review | Forward Look
Open peer review
Freely available
Separate DOI
Interlinked to the article
Typeset

26. Pilot: Molecular Cell, Cell and Neuron
Changing times | Social embedding | Data Initiatives | Peer Review | Forward Look
Cross Review: Mendeley Reader Group Pilot
Why Cross Review?
Most reviewers want to see other referee reports and be informed about the final decision.
llaborative peer review is popular at eLife and now available at Science.
Pilot: Molecular Cell, Cell and Neuron
94% of reviewers liked the discussion and would be willing to participate in the future
All authors felt that cross-review made it clearer how to revise their paper
All editors found the forum useful particularly when reviewers disagreed
Process longer than conventional
review
Additional time for reviewers
Additional time for editors
Pilots to conduct peer review in the Mendeley environment
In one pilot, reviewers encouraged to perform the review end-to-end in Mendeley, including annotating the PDF directly in addition to providing summary comments
Next pilots will include authors
We now plan to expand our ability to implement this approach more broadly
Lessons learned: logistically difficult to keep reviewers identities anonymous

27. Reviewer Recognition Platform
Changing times | Social embedding | Data Initiatives | Peer Review | Forward Look
Reviewer Recognition Platform

28. Making it easy for authors to share research data

30. So How Do You Publish A Network?30
So How Do You Publish A Network?
Inst. Data Repositorie(s)
Lab
ELN(s)
Data search
Data Management
Plans
Metadata, methods & protocols ready for preservation and publishing
Link to article
Journal
Publish data (under embargo)
Secure
discoverability
in & outside
the institution
Find
Topic
Identify gaps
Plan & Fund
Discover data, people, methods & protocols
Collect, analyze & vizualize
Store, preserve & share
Publish
Prepare, reproduce, re-use & benchmark
Domain-specific
Repositories
Primary research data lifecycle
Example – your eln being able to publish protocols directly - easing the resaerchers burden
Integrate RDM and monitor outputs
Data Journal
Researchers

31. Access, Discover: Scholix/DLIs
Changing times | Social embedding | Data Initiatives | Peer Review | Forward Look
Access, Discover: Scholix/DLIs
ICSU-WDS/RDA Publishing Data Service Working group, merged with National Data Service pilot
Cross-stakeholder – with input from CrossRef, DataCite, OpenAIRE, Europe PubMed Central, ANDS, PANGAEA, Thomson Reuters, Elsevier, and others
Proposed long-term architecture and interoperability framework:
Operational prototype at (including 1.4 Million links from various sources)
IUPAC has recommendations for what word you should use to describe a given property, but the vocabulary itself isn’t very accessible or usable itself, thus is not universally implemented. Each site decides how it wants to label a given property, which hinders indexing and reuse of the data across silos. Structured capture of information using an ELN such as Hivebench enables the researcher to report data using a consistent vocabulary without extra effort.

32. Changes in researcher responsibilities
Changing times | Collaboration | Data | In Conclusion
Changes in researcher responsibilities
Researchers still spend 25% of their time reading journal content

33. Metrics for Institutes: Data Lighthouse
Changing times | Collaboration | Data | In Conclusion
Metrics for Institutes: Data Lighthouse
What?
Service for Research Institutes (esp. librarians) to engage with researchers throughout the research data life cycle.
How?
Offer service for Librarians to interact with researchers regarding the RDM Process to:
Offer solutions to store, share, link and publish data
Monitor progress report on posting, citation, downloads of dataset
Provide monthly reporting
Research article published
Initial inquiry
Share, publish and link data
Monitor progress and provide guidance
Generate reports
DATA LIGHTHOUSE

34. Search, read, review and use published literature
Changing times | Collaboration | Data | In Conclusion
Changes in researcher responsibilities
Researchers still spend 25% of their time reading journal content
SPEAKER
TEACHER
REVIEWER
EDITOR
AUTHOR
(LAB) ANALYST
COLLABORATOR
FUND RAISER
Funding
Experiment
Manage data
Commercialize
Have impact
Analysis &
synthesis
Publish &
disseminate
Promote
research
Collaborate
& network
Search, read, review and use published literature