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Biochemistry: The Chemistry of Life
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Organic Compounds Compounds that contain CARBON are called organic.
Macromolecules are large organic molecules.
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Carbon (C) Carbon can form covalent bonds with as many as 4 other atoms (elements). Usually with C, H, O, N & P. Example: C6H12O6 (glucose)
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What are other elements you expected to be on this list?
The Atoms of Life The most frequently found atoms in the body are “CHONP” (not in this order). Carbon (C) Hydrogen (H) Oxygen (O) Nitrogen (N) Phosphorous (P) What are other elements you expected to be on this list?
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Making the Molecules of Life
Each molecule has one or more roles in living systems. Energy Structure Information
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Molecule Structure & Function
Bond types determine what a molecule does. Covalent bonds provide… Structure Store (chemical potential) energy
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Molecule Structure & Function
Ionic and hydrogen bonds are weaker but can provide... Structure: Holding different molecules together Holding parts of a single molecule together.
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Macromolecules MONOMER: individual unit / “building block”
Example: glucose POLYMER: many monomers bonded together to create a long strand Example: starch Macromolecules are all polymers made from smaller parts glucose glucose glucose glucose glucose glucose glucose
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Macromolecules Large organic molecules. Examples: 1. Carbohydrates
Also called POLYMERS. Made up of smaller “building blocks” called MONOMERS. Examples: 1. Carbohydrates 2. Lipids 3. Proteins 4. Nucleic acids (DNA and RNA)
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Carbohydrates
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Carbohydrates Range from small sugar molecules to large sugar molecules. glucose glucose maltose glucose cellulose
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Carbohydrates MONOMER = Monosaccharide: one sugar unit
Elements involved: CHO Also called “simple sugars” Examples: glucose (C6H12O6) deoxyribose ribose fructose galactose glucose
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Carbohydrates Range from small sugar molecules to large sugar molecules. Types: A. monosaccharide B. disaccharide C. polysaccharide
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Carbohydrates Monosaccharide: one sugar unit
Examples: glucose (C6H12O6) deoxyribose ribose fructose galactose glucose
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Carbohydrates Disaccharide: two sugar unit Examples:
Sucrose (glucose+fructose) Lactose (glucose+galactose) Maltose (glucose+glucose) glucose
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Carbohydrates Polysaccharide: many sugar units Called “complex carbs”
Examples: starch cellulose glycogen glucose cellulose
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Carbohydrates Functions of carbohydrates:
Short-term energy storage for plants & animals Source of carbon Structural elements of cells and tissues
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Review Questions What is the difference between a mono-, di-, and polysaccharide? Provide an example of a mono-, di-, and polysaccharide. What are 2 functions of carbohydrates?
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Lipids
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Lipids General term for compounds which are NOT soluble in water.
Lipids are hydrophobic Hydrophobic = water fearing / water hating Remember: lipids store the most energy
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Lipids *fatty acid chains
The MONOMER for lipids… *fatty acid chains 3 fatty acids & 1 glycerol make a triglyceride…
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Lipids The polymer of lipids is a Triglyceride: composed of 1 glycerol and 3 fatty acid chains (monomers). Elements involved: CHO H H-C----O glycerol O C-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH3 = O C-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH3 = fatty acids O C-CH2-CH2-CH2-CH =CH-CH2-CH2-CH2-CH2-CH3 =
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Fatty Acids There are two TYPES of fatty acids
1. Saturated: maximum # of hydrogens (no double bonds) 2. Unsaturated: less than the maximum # of hydrogens (1+ double bonds) O C-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH3 = saturated O C-CH2-CH2-CH2-CH =CH-CH2-CH2-CH2-CH2-CH3 = unsaturated
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Saturated vs. Unsaturated Fats
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Lipids Examples: 1. Fats 2. Waxes (saturated) 3. Oils (unsaturated)
4. Phospholipids 5. Steroid hormones 6. Triglycerides
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Lipids 4 functions of lipids: 1. Long term energy storage
2. Protection against heat loss (insulation), physical shock & water loss 3. Chemical messengers (hormones) 4. Major component of membranes (phospholipids)
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Review Questions What are the parts of a triglyceride?
What is the difference between a saturated and unsaturated fat? What are 2 functions of lipids?
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Proteins
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Proteins (Polypeptides)
MONOMER = Amino acids (A.A.s) Elements involved: CHON Made up of C, H, O and N (amino refers to the presence of nitrogen) There are 20 different amino acids A.A.s are bonded together by peptide bonds to create a… Polypeptide: strand of amino acids, which becomes a protein!
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Amino Acids Asparagine (Asn) Lysine (Lys) Glutamic Acid (Glu)
Phenylalanine (Phe) Leucine (Leu) Isoleucine (Ile) Valine (Val) Serine (Ser) Proline (Pro) Threonine (Thr) Alanine (Ala) Tryosine (Tyr) Histidine (His) Glutamine (Gln) Asparagine (Asn) Lysine (Lys) Glutamic Acid (Glu) Aspartic Acid (Asp) Cystenine (Cys) Tryptophan (Trp) Argenine (Arg) Glycine (Gly) Methionine (Met) Start codon
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Proteins
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Proteins (Polypeptides)
Examples of proteins: Functions: 1. Muscle Movement: 2. Hemoglobin Transport 3. Hormones Regulation 4. Albumin (egg white) Storage 5. Membranes, hair, nails Structural 6. Enzymes Cellular reactions
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Review Questions What are the monomers that make up a protein?
How are those monomers held together? What are 2 functions of proteins?
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Nucleic Acids
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Nucleic acids Two types: a. DNA (DeoxyriboNucleic Acid) - double helix
b. RNA (RiboNucleic Acid) - single strand Nucleic acids are composed of long chains of nucleotides
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Nucleic acids MONOMER = Nucleotide Nucleotides include:
phosphate group pentose sugar nitrogen base
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Nucleic acids Elements involved: CHONP MONOMER = Nucleotide
Nucleotides include: phosphate group (1 P & 4 Os) pentose sugar (5 Cs) nitrogen base: ATGC in DNA AUGC in RNA Nitrogen bases: adenine (A) cytosine (C) guanine (G) thymine (T) DNA only uracil (U) RNA only
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Nucleotide O O=P-O N CH2 O C1 C4 C3 C2 Phosphate Group
Nitrogenous base CH2 O C1 C4 C3 C2 5 5-C Sugar
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Nucleic acids POLYMER = Nucleic Acid Made of many nucleotides
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DNA - double helix P O 1 2 3 4 5 P O 1 2 3 4 5 G C T A
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Nucleic acids Examples: DNA RNA tRNA mRNA rRNA
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DNA - double helix
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Nucleic acids 5 Functions: 1. Store genetic information
2. Pass genetic information from one generation to the next 3. Create proteins 4. Determine the job of every cell in an organism 5. Identify individual organisms
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Macromolecules You are what you eat… LITERALLY!
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Review Questions What are the parts of a nucleotide?
What is the difference between RNA & DNA? What are 2 functions of nucleic acids?
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Review What is the main example of monosaccharides?
What are 3 examples of polysaccharides? What is the purpose of each one in humans? How are monosaccharides used differently in humans than polysaccharides? How are they structurally different from each other? List, in order, the types of macromolecules by their effectiveness of energy usage? (What does our body use first, second, etc?)
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Review 5. Draw one molecule of water, labeling the more positive and more negative regions. 6. Draw 3 water molecules. Label the forces that a) hold the atoms together and b) the forces that hold the molecules together 7. How could you break each of the forces from #6? 8. How is cellulose used differently in plants vs. cows vs. humans?
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