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BIOCHEMISTRY Biomolecules
The molecules that make up and run your body
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Hydrogen Bond Attractive force BETWEEN molecules
NOT a true chemical bond; very weak Only form when molecules are very close together Determine the shapes of DNA and proteins
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Hydrogen Bonding
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4 Types of Macromolecules
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ORGANIC vs. INORGANIC MOLECULES
Organic Molecules contain carbon in the presence of hydrogen. Inorganic molecules are not organic; they are NOT derived from living matter.
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CARBON COMPOUNDS All Macromolecules contain Carbon!
Carbon is unique because it has 4 valence electrons and can bond with many other atoms. Carbon can bond with other carbon atoms and form long organic chains.
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Macromolecules Constructed of units called POLYMERS
Polymers are subdivided into their basic units called MONOMERS.
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Macromolecules Polymers account for the molecular uniqueness of organisms. FOR EXAMPLE: ~20 amino acids make up all forms of life. These form every conceivable protein known to man!
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Making & Breaking of Polymers
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Making Polymers Dehydration Synthesis – two molecules are chemically joined through the use of enzymes and a loss of water
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Making & Breaking of Polymers
Hydrolysis – the bonds between monomers are broken by the enzyme and the addition of water.
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Biomolecules overview
Amoeba Sisters
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Macromolecules (AKA Biomolecules)
Carbohydrates
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Carbohydrates Made of C, H, and O Monomer = Monosaccharide
Function: To supply IMMEDIATE energy for all cell activities
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Monosaccharide Single Sugar
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Monosaccharide Examples
Pentose sugars = 5 carbons Ribose, deoxyribose, and ribulose Hexose sugars = 6 carbons Glucose, galactose, fructose
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Glucose: Your brain’s favorite food
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Disaccharides Examples: Sucrose Maltose Lactose
NOTICE: Mono & Disaccharides end in the suffix -ose
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Structural or storage molecules
Polysaccharides Many sugars Basic Formula: ( C6H10O5)n Structural or storage molecules
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Carbohydrate Review Type Function Examples Monosaccharide
Immediate energy Glucose, Fructose Disaccharide Sucrose, Maltose Polysaccharide Structure and Storage Starch, Glycogen
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Storage Polysaccharides
“Complex carbohydrates” (ENERGY STORAGE) STARCH is a PLANT storage polysaccharide that is composed entirely of glucose molecules Amylose is the simplest form of starch
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Storage Polysaccharides
Glycogen - animal starch stored in the liver and skeletal muscles of vertebrates PLANTS make their own carbohydrates ANIMALS eat the plants FOOD/ENERGY WEB IN ACTION!!
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Glycogen Storage
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Using Glycogen If your blood sugar (glucose) gets too high:
Your body stores it in your liver and skeletal muscles as glycogen If your blood sugar gets too low: Your body breaks down the glycogen and releases glucose to your blood
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Structural Polysaccharides
Cellulose and chitin Cellulose is the most abundant organic compound on earth. Chitin is found in arthropod exoskeletons and the cell walls of fungi
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Structural Polysaccharides
Cellulose in cell walls of plants must be broken down into glucose before cells can use it for energy cows, termites, and roaches have microbes in their digestive tracts that do this for them WE DON’T – that is why we can’t graze on grass for lunch!! However, we do need cellulose although we just call it FIBER in our diet: It scrubs out our intestines!
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In charge of all your body functions
PROTEINS In charge of all your body functions
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Proteins Biomolecules that are provide structure or have a function
Monomer: Amino Acid Elements: C, H, O, and N
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Basic amino acid structure
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20 main amino acids
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Protein formation Dehydration synthesis joins the amino acid monomers together using peptide bonds Sometimes called “polypeptide chains” Make up ~50% of dry weight of most cells
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Functions of Proteins Wide variety of functions...can be divided into 2 categories: STRUCTURAL: support and strengthen FUNCTIONAL: crucial roles in biological processes Proteins are VERY IMPORTANT!!!
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Structural Proteins
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Functional Proteins
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Cell Membrane Proteins
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Protein Hormones
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Proteins Structural Proteins Support and strengthen Elastin
Artery walls, lungs, intestines, skin Collagen Skin Keratin Hair, nails, skin Functional Proteins Crucial role in biological processes Hemoglobin In blood cells - carries oxygen to cells Insulin Pancreas - carries glucose to cells Antibodies & Antigens White blood cells - fight infection Enzymes Saliva, stomach - speed up reactions
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Enzyme action Enzymes can act as “catalysts” (a molecule that lowers ACTIVATION ENERGY) Can increase a reaction’s speed (rate) up to 1010 times!! The enzyme is not changed at all by the chemical reaction so can be reused over and over
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Enzyme Specificity Enzyme: protein that acts on a substrate
Substrate: molecule that is affected by the enzyme Active site: place on the enzyme where the reaction occurs ONE ENZYME ACTS ON ONLY ONE SUBSTRATE: VERY SPECIFIC ! Amylase breaks down amylose Lactase breaks down lactose
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Enzyme Action Lock and key fit: active site and substrate fit exactly
Induced fit: active site can adjust to “wrap around” substrate to get optimum fit
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Protein Denaturation Functional Proteins depend on their structure to do their job STRUCTURE DETERMINES FUNCTION Active site must be the correct shape for the substrate H-bonds hold these proteins together in their correct shape
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Protein Denaturation Extremes (too high or too low) in TEMPERATURE and pH can disrupt H-bonds causing the active site to be destroyed. The enzyme CANNOT do its function! The enzyme (protein) is then denatured (Not the same nature as before)
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Enzyme-Substrate Action
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LIPIDS
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Lipids Biomolecule that contains C, H, and O
HYDROPHOBIC (non polar): doesn’t mix with water Monomers: Glycerol and 3 fatty acids Examples: neutral fats, steroids, and phospholipids
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Neutral Fats Monomer
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Dehydration Synthesis
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Neutral Fats Monomers: Glycerol and 3 fatty acids Functions:
INSULATION (subcutaneous fat) Energy storage (Very energy dense: Fat has 9 kcal of energy per gram, while Carbs & proteins have 4 kcal of energy) Cushioning for internal organs Absorption of fat soluble vitamins (A, D, E, K; these vitamins cannot be absorbed unless they are dissolved in fat)
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Saturated Fats vs. Unsaturated
BAD GOOD Characteristic Saturated Fats Unsaturated Fats State at room temp. Solid Liquid Found in animals or plants Animal Plants Structure: bent or straight Single bonds, straight Double bonds, bent
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Saturated Unsaturated
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Steroids Monomers are carbon skeleton of 4 fused rings (add to your notes!)
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Steroids Steroids are FAT SOLUBLE and contain little oxygen
THE FOLLOWING ARE EXAMPLES: Cholesterol is found in all ANIMAL tissue. Plants do NOT contain cholesterol Cholesterol is the MOST IMPORTANT steroid since it is essential for the manufacture of ALL other steroids It also helps to STABILIZE your cell membranes.
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Examples Sex hormones: estrogen, testosterone, progesterone
Insulin: blood glucose regulation (add to notes) Aldosterone: maintains water balance Bile salts: digestion & absorption of FATS
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Phospholipids Monomers: two fatty acids and a phosphate Functions:
Form cell membrane: Phospholipid bilayer Component of Nervous Tissue
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Phospholipids Both polar and non polar qualities
Phosphate head is polar Fatty acid tail is non polar
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Phospholipid Bilayer
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Myelin Sheath: Insulates Nerve
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NUCLEIC ACIDS GENETIC MATERIAL
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Nucleic Acids Biomolecules that store and transmit genetic information
Contain elements C, H, O, N, P Monomer: Nucleic acid Phosphate Nitrogenous base Sugar (ribose or deoxyribose)
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DNA & RNA
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Nucleotides
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DNA INFORMATION Cellular site = nucleus
Function = Directs protein synthesis (contains all the instructions) Sugar = deoxyribose Nitrogenous bases = A T C G Structure = double helix
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RNA INFORMATION Cellular site = in & out of nucleus (can travel)
Function = Carries out protein synthesis (makes it happen) Sugar = ribose Nitrogenous bases = A U C G Structure = single strand
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Elements in Macromolecules
Carbohydrate C,H,O Lipids C,H,O,(P) Proteins C,H,O,N Nucleic Acids C,H,O,N,P
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Monomers Carbohydrates Mono- saccharides Lipids (neutral fats)
Glycerol & fatty acids Proteins Amino Acids Nucleic Acids Nucleotides
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Major function Carbohydrates Immediate energy & storage Lipids
Cell components Form steroids Proteins Functional Structural Nucleic Acids Store and transmit genetic info
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