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NutNet data update 15 Aug 2011 Data management update

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Presentation on theme: "NutNet data update 15 Aug 2011 Data management update"— Presentation transcript:

1 NutNet data update 15 Aug 2011 Data management update
Taxonomic resolution update

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3 Normalized data From Wikipedia: “Codd's twelve rules” are a set of thirteen rules (numbered 0-12) proposed by Edgar F. Codd, a pioneer of the relational model for databases… Edgar Frank "Ted" Codd IBM Scientist Inventor of the Relational Model * data are stored, inserted, changed, and deleted in ONLY ONE PLACE. * New data adds rows, not columns.

4 Site Site_Name 1 XYZ 2 PDQ 1 2 Borer, Seabloom et al Bulletin of the Ecological Society of America 90:205–214

5 Places & people Observed plant taxa Units of Observation Observed Data NutNet relational database Supported by U of M MSI

6 Taxon observations Connect to site
Taxonomy presents a common challenge to large ecological datasets Species are the terminal identity in a nested hirearchy, easily captured by relational db models Lookup and intersection tables can connect single taxon identity to multiple local names A lot of work has been done trying to reconcile the taxonomy

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8 ~1860 plant names ~1739 unique taxon identifiers

9 The next target: Further resolving NutNet phylogeny

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13 NutNet Results are based on your data – QC is critical
* Note any data issues as you work * Changes to data should be made in one place. Any changes, updates or deletions necessary to the raw NutNet data should be given in writing (preferably by ) to Eric Lind * Examine species list in your folder; add or correct for completeness

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