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Rad54: The Motor of Homologous Recombination
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Rad54: DNA Translocation
The DNA translocation activity (forming positive and negative supercoils) is required for all other Rad54 activities in the cell Mazin et al. 2010
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Rad54: Chromatin Remodeling
The chromatin remodeling and protein (histone) displacement activities free the DNA for processing by other proteins (such as Rad51 and Rad52) Mazin et al. 2010
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Rad54: Rad51 Interaction Rad54 stabilizes the Rad51 nucleoprotein filament and also stimulates stand invasion Mazin et al. 2010
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Rad54: Dual Threat Rad54 can both stabilize the Rad51 filament (in the presence of Ca2+) and dissociate Rad51 (in the absence of Ca2+) -Dissociation of Rad51 is a result of the translocation activity Mazin et al. 2010
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Rad54: Branch Migration The branch migration activity allows for processing of HR intermediates -Mus81 activation by Rad54 resolves HR intermediates Mazin et al. 2010
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The ATPase Motor All Rad54 activities (with the exception of Rad51 stabilization) require the ATPase activity Walker A Box [G,X,G,K,S/T]
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The ATPase Motor Structure of the “Walker A Box”
-Site of ATP binding and hydrolysis T184 Zebrafish Rad54 C-terminal domain K183 L181 Thoma et al. 2005
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Conserved YET Disputed
Sequence PCNA Interacting Protein sequence Box (PIP Box) (Burgess et al) OR -DNA binding sequence extending Motif III (Zhang et al) -Both agree this sequence is necessary for ATPase activity
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Conserved YET Disputed
Sequence Tyrosine and Phenylalanine mutants have shown significant decreases in activity Thoma et al. 2005
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Hydropathy Plot No significant hydrophobic residues with some more significant hydrophilic residues -Consistent with a DNA-interacting protein
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References
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