1. Z-score -1 1 miR390 TAS3c Phased siRNAs Target siR506 siR406
Z-score
Phased siRNAs
Target
siR506
LRR
GMT
Cis-cleavage
siR406
NBS
Lipase GO
ERDF
miRNA trigger
miR390
siR4
MYB
LRR HT ZF
DRP
MADS
PBR
siR2343
TAS3c
siR1551
siR370
Non-phased siRNAs
ERDF SS
NBS ED
MATE
Lipase GO
Target
siR2074
APF
siR1720
DEAD
LRK TL
siR2359
ARF
siR2360 PH
Figure 8. miR390-directed pha-siRNA regulatory pathway
The miR390 directed pha-siRNA regulatory pathway is shown as indicated. The blue arrows and lines show the regulatory pathway of pha-siRNA s produced from TAS3c, while the dark orange arrows and lines show the regulatory pathway of cis-cleavage by pha-siRNA, siR406. The colors in the boxes from left to right represent the Z-score of expression values of sRNAs in the leaf, flower and boll, respectively. LRR: Leucine-rich repeat family protein; GMT: DP-mannose transporter; NBS: NBS-LRR disease resistance protein; Lipase: Lipase; GO: Glycolate oxidase; ERDF: Early-responsive to dehydration family protein; MYB: MYB transcription factor; HT: hexose transporter; ZF: Zinc finger family protein; DRP: DNA-directed RNA polymerase family protein ; MADS: MADS-box transcription factor; PRP: Phenylcoumaran benzylic ether reductase-like protein; APF: Amino acid permease family protein; DEAD: DEAD-box ATP-dependent RNA helicase; LRK: LysM type receptor kinase; TL: Temperature-induced lipocalin; ARF: Auxin response factor; PH: Pleckstrin homology domain-containing family protein; SS: Spermidine synthase; ED: Elongation defective 1 family protein; MATE: MATE efflux family protein.