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Empirical Studies of Evolvability in Tierra Preliminary Results
Tom Ray ATR Kyoto Japan Zoology, University of Oklahoma
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Objectives The objective is to understand how the design and configuration of Tierra-like systems affects the properties of their evolution The first step is to develop quantitative measures of evolvability
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Simple Test Under certain conditions, Tierra tends to evolve towards smaller replicators. Once a minimal size is reached, evolution stops. A good index should be able to discriminate the period of evolutionary optimization from the stasis that follows.
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Evolution and Stasis
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Period of Stasis origin of dominant genotype
In the run of , genotype 27aal appeared at t=800, and dominated the remainder of the run (until end at t=2500)
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Origin of 27aal
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Period of Stasis origin of dominant parasite
At t=1200 a 15 byte parasite entered into an ecologically and evolutionarily stable equilibrium with the 27 byte host
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Origin of Parasite
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Viable Mutants The 27 byte replicator includes three loci at which two instructions are acceptable (8 neutral mutants) In addition there are viable variants including one-byte insertions or deletions The 15 byte parasite includes one locus at which two instructions are acceptable and one locus at which any (of 32) instructions are acceptable (64 neutral mutants)
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Host and Parasite Populations
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Indices of Evolvability? Based on Genotypes
Number Turnover: births + deaths of genotypes Diversity: negative sum of p log p Integral Sum: all populations over time Integral Max: largest pop integral over time Maximum Proportion Average Age
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Genotype Number
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Turnover: births + deaths
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Diversity: - sum of p log p
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Maximum Proportion
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Integral Sum: all populations
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Integral Max: largest pop integral
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Integral Max & Max Proportion
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Integral Sum: all populations
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Integral Max: largest pop integral
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Average Age
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Web Pages This presentation: evolvability.html Tierra Home Page: Tom Ray:
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The End
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