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Digital Pathology Early Adoption Douglas J
Digital Pathology Early Adoption Douglas J. Hartman, MD Pathology Informatics Summit May 25, 2016
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Background Very few labs in the USA have gone entirely digital for primary diagnosis UPMC has started their conversion to a digital pathology platform for primary diagnosis sign out
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Clinical Use Cases Primary diagnosis Incremental workload increase
Stepwise subspecialty rollout plan Surgical pathology (first small biopsies, fewer parts) Internal (UPMC) & external consults IHC core lab (centralization) Breast marker image analysis PathXL education partnership To do: Archive outside consults, frozen section, tumor board, etc.
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Omnyx Production Use Cases
Begin utilizing Omnyx for Clinical Use Cases: Start Date – (8/24/2015) Dermatopathology - 10 cases/day (~30 slides) GI (quicks) - 10 cases/day (~30 slides) Start Date - (9/21/2015) Autopsy – 1 case/day (~15 slides) Start Date - (10/13/2015) Neuropathology – 1autopsy case/day Start Date – (10/19/2015) Pediatric Pathology (CHP) – 10 cases/day (max 3 parts) (~30 slides) Start Date – (10/26/2015) GYN/Breast biopsies (Magee) – 10 cases/day (~10 slides) Start Date – (11/16/2015) GU (prostate biopsies) – 2 cases/day Start Date – (12/14/2015) UPMC St. Margaret’s IHC Review Start Date – (1/4/2016) UPMC Horizon IHC Review Start Date – (2/2/2016) UPMC Passavant IHC Review Start Date – (3/7/2016) UPMC Magee Placenta
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Technology VL120 Omnyx scanner
Digital Pathology System version integrated with Cerner CoPathPlus V Scanned each slide at 40x Slides viewed at Omnyx workstations
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Workflow Process Slides were selected within the histology lab and diverted to be scanned Case Selection based on: GI Quicks (biopsies) Selected in the histology lab from the routine output Cases with 3 or less parts No STAT cases Principally initial H&E stains only Without impact on slide delivery
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Core Histology Lab
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First Case Signed Out!
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Results 529 cases were reviewed prior to review of the glass slides
Diagnosis prior to reviewing glass slides was entered into sharepoint form
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Sharepoint Form
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Results: Digital vs Glass
470 cases (91%) were interpreted the same for the digital slides as the glass slides No major discrepancies occurred Of 54 cases with minor discrepancy, the majority (70%) involved evaluation of inflammation or lack of confidence in identifying helicobacter organisms
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Inflammatory Cells
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Helicobacter Organisms
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Technical Issues Technical Issues related to integration
Stain info suppression Query service delays No broken slides during study period
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Future Directions Improve workflow within the histology laboratory
Scanning specific specimens at higher mag or using a different technology (Helicobacter cases?) Adjustment by pathologists
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GI Pathologists Reet Pai, MD Jon Davison, MD Douglas J. Hartman
Shih-Fan Kuan MD, PhD Michael Landau, MD Changqing Ma, MD, PhD Aatur Singhi, MD, PhD
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ISD team Liron Pantanowtiz, MD Jeff McHugh Tony Piccoli
Matt O’Leary (Digital Pathology Team) Chelsea Watkins Brad Clifford Ryan Mitchell
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Histology Team Rachel Wall Jim Edwards
Keith Yester (Histology Lab at CLB) Eric Ambrozic Shaquayla Hill
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Questions?
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Office Workstation
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Signout room of the future
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Omnyx Numbers Per Site 29,000 total SLIDES scanned
65,000 total CASES in Omnyx
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Resolved Issues Message queue bottlenecking Image streaming issue
Query service messages CoPath messages Image streaming issue Error queue overflow Slide handling scanner errors Xylene level change CoPath filtered stains Blank stains
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