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Optimal Dynamic Treatment Regimes
Julia Wang, Kwan Lee, and Xiwu Lin RWE Analytics at Janssen Quantitative Sciences Sept. 7th, 2017
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What is Optimal DTR? Dynamic Treatment Regimes (DTR) are individually tailored treatment sequences based on subject-level information. A DTR algorithm provides a mapping from the space of subject-level information (including baseline, treatments, and responses) to the treatment action space. Optimal DTRs maximize overall average treatment effects for a population following such regimes.
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bmiData from r Package iqLearn
> head(bmiData) gender race parent_BMI baseline_BMI month4_BMI month12_BMI A1 A2 CD MR CD MR MR CD CD CD CD CD MR MR
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Baseline Characteristics
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Baseline Characteristics
Observations On-study Baseline Characteristics
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Baseline Characteristics
Observations On-study Baseline Characteristics Randomized Groups
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Two-Stage Randomized Treatment Set-up
MR or CD Stage 2: MR or CD Baseline
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Subject-level information at Stage 1:
Gender, Race, Baseline BMI, and Parents BMI Subject-level information at Stage 2: Gender, Race, Baseline BMI, Parents BMI and Month 4 BMI Stage 1 Baseline BMI vs. Parent's BMI Stage 2 Month 4 BMI vs. Parent's BMI 50 50 45 45 Baseline BMI Month 4 BMI 40 40 35 35 30 30 25 25 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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Randomized Regime Stage 1 Baseline BMI vs. Parent's BMI Stage 2
Month 4 BMI vs. Parent's BMI MR CD 50 50 45 45 Baseline BMI Month 4 BMI 40 40 35 35 30 30 MR CD 25 25 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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A partition? Optimized Regime Stage 1 Baseline BMI vs. Parent's BMI
Month 4 BMI vs. Parent's BMI MR CD 50 50 45 45 Baseline BMI Month 4 BMI 40 40 35 35 30 30 MR CD 25 25 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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Data Generation Process
Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space Data Generation Process Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD Y Baseline Characteristics This process can be either randomized or observational, how do we estimate the optimal DTR from the data obtained?
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A Conditional Expectation Property
The Goal: Maximize E ( Y ) E ( Y ) = E ( E ( Y | S1 )) = E ( E ( E ( Y | S1 , S2 ))) = E ( E ( E ( E ( Y | S1 , S2, S3 )))
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A Conditional Expectation Property
The Goal: Maximize E ( Y ) E ( Y ) = E ( E ( Y | S1 )) = E ( E ( E ( Y | S1 , S2 ))) = E ( E ( E ( E ( Y | S1 , S2, S3 ))) Maximize by partition the subject-level space defined by S1, S2, S3
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A Conditional Expectation Property
The Goal: Maximize E ( Y ) E ( Y ) = E ( E ( Y | S1 )) = E ( E ( E ( Y | S1 , S2 ))) = E ( E ( E ( E ( Y | S1 , S2, S3 ))) M-EY Maximize by partition the subject-level space defined by S1, S2, S3
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A Conditional Expectation Property
The Goal: Maximize E ( Y ) E ( Y ) = E ( E ( Y | S1 )) = E ( E ( E ( Y | S1 , S2 ))) = E ( E ( E ( E ( Y | S1 , S2, S3 ))) M-EY M-EY Maximize by partition the subject-level space defined by S1, S2, S3
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A Conditional Expectation Property
The Goal: Maximize E ( Y ) E ( Y ) = E ( E ( Y | S1 )) = E ( E ( E ( Y | S1 , S2 ))) = E ( E ( E ( E ( Y | S1 , S2, S3 ))) M-EY
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A Conditional Expectation Property
The Goal: Maximize E ( Y ) E ( Y ) = E ( E ( Y | S1 )) = E ( E ( E ( Y | S1 , S2 ))) = E ( E ( E ( E ( Y | S1 , S2, S3 ))) M-EY Maximize by partition the subject-level space defined by S1 and S2
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A Conditional Expectation Property
The Goal: Maximize E ( Y ) E ( Y ) = E ( E ( Y | S1 )) = E ( E ( E ( Y | S1 , S2 ))) = E ( E ( E ( E ( Y | S1 , S2, S3 ))) MM-EY M-EY Maximize by partition the subject-level space defined by S1 and S2
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A Conditional Expectation Property
The Goal: Maximize E ( Y ) E ( Y ) = E ( E ( Y | S1 )) = E ( E ( E ( Y | S1 , S2 ))) = E ( E ( E ( E ( Y | S1 , S2, S3 ))) MM-EY MM-EY M-EY Maximize by partition the subject-level space defined by S1, and S2
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A Conditional Expectation Property
The Goal: Maximize E ( Y ) E ( Y ) = E ( E ( Y | S1 )) = E ( E ( E ( Y | S1 , S2 ))) = E ( E ( E ( E ( Y | S1 , S2, S3 ))) MM-EY MM-EY M-EY
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A Conditional Expectation Property
The Goal: Maximize E ( Y ) E ( Y ) = E ( E ( Y | S1 )) = E ( E ( E ( Y | S1 , S2 ))) = E ( E ( E ( E ( Y | S1 , S2, S3 ))) MM-EY MM-EY M-EY Maximize by partition the subject-level space defined by S1
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD Y Baseline Characteristics
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
History Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD Y Baseline Characteristics
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
History Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD Y Baseline Characteristics
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
History Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD Y Baseline Characteristics
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
History Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD M-EY Y Baseline Characteristics
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
History Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD M-EY Y Baseline Characteristics
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
History Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD M-EY Baseline Characteristics
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
History Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD M-EY Baseline Characteristics
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
History Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD M-EY Baseline Characteristics
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
History Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD MM-EY M-EY Baseline Characteristics
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
History Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD MM-EY Baseline Characteristics
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Estimation of DTR as a Recursive Partitioning of the Subject-level Information Space
History Stage 1 TRT OBS MR CD Stage 2 TRT OBS MR CD Stage 3 TRT OBS MR CD Stage 4 TRT OBS MR CD MMM-EY Baseline Characteristics We need to be able to link the outcome Y with the history space. One such method of optimal DTR estimation is Q-learning
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Q-learning Recursive Linear Model Fitting, with treatment by covariates interaction
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Q-learning Recursive Linear Model Fitting, with treatment by covariates interaction
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Q-learning Recursive Linear Model Fitting, with treatment by covariates interaction MMM-EY MM-EY M-EY
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r DTR Packages iqLearn DynTxRegime DTRreg DTR DTRlearn
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Illustration 1 using bmiData and Q-learning Stage 1 only and Parent’s BMI only
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Month 4 and Month 12 Outcome Variable
y = -100*(Month12_BMI – Baseline_BMI)/Baseline_BMI y4 = -100*(Month14_BMI – Baseline_BMI)/Baseline_BMI
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Weight Reduction Outcome at Month 4 vs. Parental BMI
MR CD 20 20 Negative Percent Change in BMI at 4 Month Negative Percent Change in BMI at 4 Month 10 10 −10 −10 −20 −20 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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Weight Reduction Outcome at Month 4 vs. Parental BMI
MR CD 20 20 Negative Percent Change in BMI at 4 Month Negative Percent Change in BMI at 4 Month 10 10 −10 −10 −20 −20 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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Treatment by Parent’s BMI interaction
Expected Weight Reduction Outcome at Month 4 vs. Parental BMI Treatment by Parent’s BMI interaction 20 Negative Percent Change in BMI at 4 Month ( , 7.96 ) ● 10 −10 MR CD −20 25 30 35 40 45 50 Parent's BMI
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●● Expected Weight Reduction Outcome at Month 4 vs. Parental BMI 20
Negative Percent Change in BMI at 4 Month ●●● ●● ● ●●● ●●●●●● ( , 7.96 ) 10 ●●●●●● ● ●● ●●●●● ● ● ● ●● ● ●● ●●● ●●●●●● ●● ●●●●●●●●●●●●●●●● ●● ●●●● ●●●● ●● ● ● ●●●●●●●●●● ●● ●● ●●● ●●●●●●●● ●●●● ● ● ● ● ●●●●●● ●●●● ●●● ● ● ● ● ●● ●●● ●● ● ● ● ●●● ● ●● ●●●● ● ● −10 ●● ● MR CD −20 25 30 35 40 45 50 Parent's BMI
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●●● Expected Weight Reduction Outcome at Month 4 vs. Parental BMI ● MR
CD 20 20 Negative Percent Change in BMI at 4 Month ●● ● Negative Percent Change in BMI at 4 Month ● ● ●● ●●● ●●● 10 ● ●●● 10 ● ●●● ●● ●●● ● ● ● ● ●●●●●●●●●●●● ●●●●●●●●● ●●●●●●●●●● ●●●●●●●●●●●●● ●●●●●● ●●●●●● ●● ●● ● ●● ●● ● ● ●● ● ●● ● ● ●● ●● ● ●● ●● ●● ● ● −10 −10 ● −20 −20 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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●● Expected Weight Reduction Outcome at Month 4 vs. Parental BMI ● MR
CD 20 20 ●● Negative Percent Change in BMI at 4 Month ●● ● Negative Percent Change in BMI at 4 Month ● ● ● ●● ● ●● ●● ●●● ● ● ●●● ●● 10 ● ●●● 10 ●● ●● ● ●● ●●● ●● ●● ● ●● ●● ● ●● ● ●●●●● ● ● ●●●● ●●●●●●●●●●●●● ●● ●●●●●● ●● ●●●●●●● ●●●● ● ● ● ● ●●●●●● ●●●●● ● ● ● ● ● ●●●●●● ●●●●●●●●●●●●●●●●●●●●●●●●●●●●●●● ● ●● ●● ● ●● ●● ● ● ●● ● ●● ● ● ●● ●● ● ●● ●● ●● ● ● −10 −10 ● −20 −20 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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Optimal Expected Weight Reduction Outcome at Month 4 vs. Parental BMI
MR CD 20 20 ●● Negative Percent Change in BMI at 4 Month ●● ● Negative Percent Change in BMI at 4 Month ● ● ● ●● ● ●● ●● ●●● ● ● ●●● ●● 10 ● ●●● 10 ●● ●● ● ●● ●●● ●● ● ●● ●●●●●●●● ●●●●●●●●●●●●●●●●●●●●●●●●● ●● ● ●●●●●●●●●●●●●●●●●●●●●●●●●●●●● ●●●●●● ●● ● ● ● −10 −10 −20 −20 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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Optimal Expected Weight Reduction Outcome at Month 4 vs. Parental BMI
MR CD 20 20 ●● Negative Percent Change in BMI at 4 Month ●● ● Negative Percent Change in BMI at 4 Month ● ● ● ●● ● ●● ●● ●●● ● ● ●●● ●● 10 ● ●●● 10 ●● ●● ● ●● ●●● ●● ● ●● ●●●●●●●● ●●●●●●●●●●●●●●●●●●●●●●●●● ●● ● ●●●●●●●●●●●●●●●●●●●●●●●●●●●●● ●●●●●● ●● ● ● ● −10 −10 −20 −20 25 35 30 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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A Classification Problem
Expected Weight Reduction Outcome at Month 4 vs. Parental BMI MR CD Loss 20 20 ●● Negative Percent Change in BMI at 4 Month ●● ● Negative Percent Change in BMI at 4 Month ● ● ● ●● ● ●● ●● ●●● ● ● ●●● ●● 10 ● ●●● 10 ●● ●● ● ●● ●●● ●● ●● ● ●● ●●●●●● ●● ●●●●●● ●● ●●●●●●● ●●●● ● ● ●● ● ●●●●● ●● ● ● ● ●●●● ●●●●●●●●●●●●● ●●●●●●●●●●●●●●●●●●●●●●●●●●●●●●● ● ● ●●●●●● ●●●●● ● ● ● ● ● ● ●● ●● ● ●● ●● ● ● ●● ● ●● ● ● ●● ●● ● ●● ●● ●● ● ● −10 −10 ● A Classification Problem −20 −20 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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Illustration 2 using bmiData Stage 1 only and Parent’s BMI and Baseline BMI
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Model Fitted MR (A1=1) and CD (A1=-1)
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Predicted Stage 1 Optimal Treatment based on Month 4 Outcome MR Group
Demarcation Line MR better CD better 50 45 Baseline BMI 40 35 30 25 30 35 40 45 50 Parent's BMI
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Predicted Stage 1 Optimal Treatment based on Month 4 Outcome CD Group
Demarcation Line MR better CD better 50 45 Baseline BMI 40 35 30 25 30 35 40 45 50 Parent's BMI
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Expected Weight Reduction Outcome at Month 4 vs. Parental BMI
Parent’s BMI only 20 Negative Percent Change in BMI at 4 Month ( , 7.96 ) ● 10 −10 MR CD −20 25 30 35 40 45 50 Parent's BMI
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Predicted Stage 1 Optimal Treatment based on Month 4 Outcome MR Group
Demarcation Line MR better CD better 50 45 Baseline BMI 40 35 30 30.95 25 30 35 40 45 50 Parent's BMI
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Predicted Stage 1 Optimal Treatment based on Month 4 Outcome MR Group
Demarcation Line MR better CD better 50 45 Baseline BMI 40 35 30 30.95 25 30 35 40 45 50 Parent's BMI
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●● Expected Weight Reduction Outcome at Month 4 vs. Parental BMI ● MR
CD 20 20 ●● Negative Percent Change in BMI at 4 Month ●● ● Negative Percent Change in BMI at 4 Month ● ● ● ●● ● ●● ●● ●●● ● ● ●●● ●● 10 ● ●●● 10 ●● ●● ● ●● ●●● ●● ●● ● ●● ●● ● ●● ● ●●●●● ● ● ●●●● ●●●●●●●●●●●●● ●● ●●●●●● ●● ●●●●●●● ●●●● ● ● ● ● ●●●●●● ●●●●● ● ● ● ● ● ●●●●●● ●●●●●●●●●●●●●●●●●●●●●●●●●●●●●●● ● ●● ●● ● ●● ●● ● ● ●● ● ●● ● ● ●● ●● ● ●● ●● ●● ● ● −10 −10 ● −20 −20 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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Optimal vs. Predicted Month 4 Outcome
MR CD 18 20 Optimal Predicted Month 4 Outcome Optimal Predicted Month 4 Outcome 16 10 14 12 10 −10 8 −20 6 −20 −10 10 20 6 8 10 12 14 16 18 Predicted Month 4 Outcome Predicted Month 4 Outcome
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Illustration 3 using bmiData Both Stages Stage 1: Parents BMI and Baseline BMI Stage 2: Parents BMI and Month 4 BMI
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Models Fitted Stage 2: y ~ gender + parent_BMI + month4_BMI +
A2*(parent_BMI + month4_BMI) A2 coded as 1 and -1 Stage 1: Opt_y~ gender + race + parent_BMI + baseline_BMI A1*(parent_BMI + baseline_BMI) A1 coded as 1 and -1
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Predicted Stage 2 Optimal Treatment based on Month 12 Outcome MR Group
Demarcation Line MR better CD better 45 40 Month 4 BMI 35 30 25 30 35 40 45 50 Parent's BMI
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Predicted Stage 2 Optimal Treatment based on Month 12 Outcome CD Group
Demarcation Line MR better CD better 45 40 Month 4 BMI 35 30 25 30 35 40 45 50 Parent's BMI
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Predicted Stage 1 Optimal Treatment based on Optimal Month 12 Outcome MR Group
Demarcation Line MR better CD better 50 45 Baseline BMI 40 35 30 25 30 35 40 45 50 Parent's BMI
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Predicted Stage 1 Optimal Treatment based on Optimal Month 12 Outcome CD Group
Demarcation Line MR better CD better 50 45 Baseline BMI 40 35 30 25 30 35 40 45 50 Parent's BMI
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Models Fitted Stage 2: y ~ gender + parent_BMI + month4_BMI +
A2*(parent_BMI + month4_BMI) A2 coded as 1 and -1 Contrast Term Stage 1: Opt_y~ gender + race + parent_BMI + baseline_BMI A1*(parent_BMI + baseline_BMI) A1 coded as 1 and -1
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Estimated Contrast Term vs. Parent's BMI in Stage 2
MR (coded as 1) CD (coded as −1) 4 4 2 2 Estimated Contrast Term Estimated Contrast Term −2 −2 −4 −4 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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Switch!!! Estimated Contrast Term vs. Parent's BMI in Stage 2
MR (coded as 1) CD (coded as −1) 4 4 2 2 Estimated Contrast Term Estimated Contrast Term Switch!!! −2 −2 −4 −4 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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Switch!!! Estimated Contrast Term vs. Parent's BMI in Stage 2
MR (coded as 1) CD (coded as −1) 4 4 2 2 Estimated Contrast Term Estimated Contrast Term Switch!!! −2 −2 −4 −4 25 30 35 40 45 50 25 30 35 40 45 50 Parent's BMI Parent's BMI
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The Goal of Optima DTR maximize overall average treatment effects for a population following such regimes The outcome of a fixed treatment regime can be estimated from the population of subjects whose observe regime is the same as the optimal regime.
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Estimated Mean Y 9.9284
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7.9175 8.0631 3.5236 6.2016 Estimated Mean Y 9.9284
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What if the data is observational?
Use Inverse Probability Weighting, at each stage It creates an approximate pseudo-randomized population at each stage Why?
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IPW creates an approximate pseudo-randomized population
Assuming there are N subjects in the study, and the probability of being treated is p We will have (on average) N*p treated subjects. If we weight each of these subjects by 1/p, then these N*p subjects will represent N*p*(1/p)=N subjects. The same reasoning applies to the control subjects weighted by 1/(1-p), and they will represent on average N*(1-p)*(1/(1-p))=N subjects.
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An IPW Illustration Assuming there are N=90m (m is an integer multiplier) subjects in the study, evenly spread within a single confounder with 9 subgroups; The probability of being treated varies from p = 0.1, 0.2, to 0.9 within each subgroup of the confounder. Within each subgroup, we will have (on average) n1=10m*p treated and n2=10m*(1-p) controls. This leads to: n1*(1/p) = n2* (1/(1-p)) = 10m Conclusion: IPW balances the distribution of the confounders. However, in practice, these probabilities, also called propensity scores, need to be estimated.
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Distribution of Confonders before IPW
● ● 0.1 0.2 ● 0.3 ● 0.4 0.5 ● 0.6 ● 0.7 0.8 ● 0.9 Gr. 1 Gr. 2 Gr. 3 Gr. 4 Gr. 5 Gr. 6 Gr. 7 Gr. 8 Gr. 9 Subjects Confonder Subgroups
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● Distribution of Confonders for Treated Group before IPW Gr. 1 Gr. 2
Subjects Confonder Subgroups
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Distribution of Confonders for Treated Group before IPW
● 1/ 0.9 ● 1/ 0.8 ● 1/ 0.7 ● 1/ 0.6 ● 1/ 0.5 ● 1/ 0.4 ● 1/ 0.3 ● 1/ 0.2 ● 1/ 0.1 Gr. 1 Gr. 2 Gr. 3 Gr. 4 Gr. 5 Gr. 6 Gr. 7 Gr. 8 Gr. 9 Subjects Confonder Subgroups
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● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●
Distribution of Confonders for Treated Group before IPW ● ● ● ● ● ● ● ● ● ● Subjects ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● 1 / 0.1 ● 2 / 0.2 ● 3 / 0.3 ● 4 / 0.4 ● 5 / 0.5 ● 6 / 0.6 ● 7 / 0.7 ● 8 / 0.8 ● 9 / 0.9 Gr. 1 Gr. 2 Gr. 3 Gr. 4 Gr. 5 Gr. 6 Gr. 7 Gr. 8 Gr. 9 Confonder Subgroups
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● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●
Distribution of Confonders for Treated Group before IPW ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● Subjects ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● Gr. 1 Gr. 2 Gr. 3 Gr. 4 Gr. 5 Gr. 6 Gr. 7 Gr. 8 Gr. 9 Confonder Subgroups
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● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●
Distribution of Confonders for Treated Group after IPW ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● Subjects ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● Gr. 1 Gr. 2 Gr. 3 Gr. 4 Gr. 5 Gr. 6 Gr. 7 Gr. 8 Gr. 9 Confonder Subgroups
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Distribution of Confonders before IPW
● ● 0.1 0.2 ● 0.3 ● 0.4 0.5 ● 0.6 ● 0.7 0.8 ● 0.9 Gr. 1 Gr. 2 Gr. 3 Gr. 4 Gr. 5 Gr. 6 Gr. 7 Gr. 8 Gr. 9 Subjects Confonder Subgroups
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● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●
Distribution of Confonders for Control Group before IPW ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● Subjects ● ● ● ● ● ● ● ● ● ● Gr. 1 Gr. 2 Gr. 3 Gr. 4 Gr. 5 Gr. 6 Gr. 7 Gr. 8 Gr. 9 Confonder Subgroups
85
Distribution of Confonders for Control Group before IPW
● 1/ 0.9 ● 1/ 0.8 ● 1/ 0.7 ● 1/ 0.6 ● 1/ 0.5 ● 1/ 0.4 ● 1/ 0.3 ● 1/ 0.2 ● 1/ 0.1 ● 1/ 0.2 Subjects Gr. 1 Gr. 2 Gr. 3 Gr. 4 Gr. 5 Gr. 6 Gr. 7 Gr. 8 Gr. 9 Confonder Subgroups
86
● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●
Distribution of Confonders for Control Group before IPW ● 9 / 0.9 ● 8 / 0.8 ● 7 / 0.7 ● 6 / 0.6 ● 5 / 0.5 ● 4 / 0.4 ● 3 / 0.3 ● 2 / 0.2 ● 1 / 0.1 ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● Subjects ● ● ● ● ● ● ● ● ● ● Gr. 1 Gr. 2 Gr. 3 Gr. 4 Gr. 5 Gr. 6 Gr. 7 Gr. 8 Gr. 9 Confonder Subgroups
87
● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●
Distribution of Confonders for Control Group before IPW ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● Subjects ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● Gr. 1 Gr. 2 Gr. 3 Gr. 4 Gr. 5 Gr. 6 Gr. 7 Gr. 8 Gr. 9 Confonder Subgroups
88
● Distribution of Confonders for Control Group after IPW Gr. 1 Gr. 2
Subjects Confonder Subgroups
89
● ● Distribution of Confonders after IPW Gr. 1 Gr. 2 Gr. 3 Gr. 4 Gr. 5
Subjects Confonder Subgroups
90
Propensity Scores The more accurately a propensity score can be estimated, the better it is at reducing confounding and bias. How to estimate propensity scores properly is a very big topic in itself.
92
7.9175 8.0631 3.5236 6.2016 Estimated Mean Y 9.9284 dwols:
93
Comparing Q-learning vs. dwols using bmiData
Stage 2 dwols Q-learning CD MR 94 1 4 111 Stage 1 dwols Q-learning CD MR 111 1 2 96
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