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11/22/2018 7:29:58 AM
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EMBOSS interfaces Command line: Windows, Cygwin WEB:
Jemboss (needs java web start) EMBOSSGUI (needs Apache or other webserver) now installed locally in ICGEB server 11/22/2018 7:29:58 AM
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EMBOSS suggested reading
Chapter 12 of “Sequence analysis in a nutshell” (Markel & Léon EMBOSS quick guide “doc” directory for more details Manual Programs Tutorials 11/22/2018 7:29:58 AM
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EMBOSS Command line Windows UNIX 11/22/2018 7:29:58 AM
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EMBOSS for UNIX Download EMBOSS-2.8.0.tar from course website
tar xvf EMBOSS tar cd EMBOSS-2.8.0 ./configure make make install ENVIRONMENT SETTINGS: (can be included in .bashrc file) PATH=$PATH:/home/workshop/EMBOSS-2.8.0/emboss export PLPLOT_LIB=/home/workshop/EMBOSS-2.8.0/plplot/lib export EMBOSS_DATA=/home/workshop/EMBOSS-2.8.0/emboss/data 11/22/2018 7:29:58 AM
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EMBOSSwin Copy embosswin-0.7-setup into your desktop from course webpage Double click Follow the instructions After finishing the setup Open windows shell Proceed with examples 11/22/2018 7:29:58 AM
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