1. Rebecca Crowley Jacobson, MD, MS
Professor, DBMI
CIO, Institute for Personalized Medicine
Director of NLM funded Informatics Training Program
Elected Fellow of ACMI, 2010

2. 1. Deep Phenotyping
Enable precision medicine efforts by combining natural language processing, medical knowledge representation, and software development to create state-of-the art methods and systems for extracting phenotypes from EMRs and other sources, and for linking them to biospecimens
Precision Medicine
EMRs
Biobanks
Research
Repositories

3. 1. Deep Phenotyping Projects
DeepPhe collaboration with Guergana Savova and cTAKES team to develop open-source cancer phenotype extraction system.
cancer.healthnlp.org
Funding: National Cancer Institute (NIH) 1U24CA184407
TIES Cancer Research Network collaboration with Roswell Park, UPenn and Georgia Regents to develop a biobank network across US cancer centers sharing data and biospecimens, based on our TIES NLP software.
ties.pitt.edu
Funding: National Cancer Institute (NIH) 1U24CA180921

4. 2. Learning Health System
Improve efficiency and quality of healthcare by developing novel methods for individually tailored and personally relevant feedback to healthcare providers based on analysis of health data

5. 2. Learning Health System Projects
Smart Training Systems for pathologists building on the cognitive tutoring paradigm Previous funding: National Library of Medicine (NIH) R01 LM , National Cancer Institute (NIH) R25 CA101959, Agency for Healthcare Quality and Research U18 HS016657
Automated guideline adherence system for clinical officers in Malawi. Collaboration with Zach Landis Lewis and Gerry Douglas
Previous Funding: Fogarty International Center 1R03TW009217
Automated Audit and Feedback for radiologists blends NLP and health analytics to drive automated feedback within Radiology Information System, specific to provider
Currently seeking funding