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ciBioBase Data Use in ArcGIS 10x
Tutorial 1: Converting ciBioBase point feature grids to raster* *Requires the Spatial Analyst Extension
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Export Depth, Vegetation, or Bottom Hardness (Composition) Grid Data from your ciBioBase account.
Data are exported as comma delimited point features in the universal WGS84 global coordinate system.
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Add filter Grid Data exports must be cleansed of 1.70E+38 No Data placeholders The Excel Filter works well to execute this. Delete all rows with this filtered value Delete all 1.70E+38 rows (select top row; hold shift key and select bottom row; hit delete key) - These are no data placeholders generated in the gridding process and are meaningless
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Filter all values less than zero; change to zero
Sometimes the smoothing function of kriging “undershoots” minimum values and can create negative biovolume numbers. It is impossible to have negative biovolume; rather the value should be zero Select all values less than 0; highlight top cell; change to 0; select all cells; hit Ctrl-D (fill down) - Sometimes the kriging smoothing process can undershoot the minimum value of zero. It is impossible to have negative biovolume, thus a negative number = 0; same goes with values greater than 1
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Filter all values greater than 1; change to 1
Sometimes the smoothing function of kriging “overshoots” minimum values and can create biovolume numbers > 1 (or >100%). It is impossible to have biovolume greater than 1; rather the values greater than 1 should be changed to 1 Select all values greater than 1; highlight top cell; change to 1; select all cells; hit Ctrl-D (fill down) Save the text file – ready for import into ArcGIS
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Add X,Y Data and specify the WGS84 coordinate system
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The view of unprojected ciBioBase grid data
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Right click on Layers Select a projection. UTM NAD83 is a popular US projection. Zone-based is a popular datum (MN is Zone 15) Change to meters in order to get display in meters Project the data into a meter projection (UTM is pretty standard) in the Data Frame Properties. Change the Display to Meters
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If using UTMs NAD83 Datum, consult this chart to determine your zone (US Only). Datum vary widely across the globe; use one that is in accordance with your local standard
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- Select the same projection
Project the actual data into meters using the Conversion Tools in ArcToolbox
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Activate Spatial Analyst; Convert Feature to Raster function; verify point spacing/grid cell size using the measure tool; add 0.1 as an initial buffer
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10.1 increment ciBioBase gridding process uses a target grid cell size (5-m is default). Actual individual cell sizes in ciBioBase are dynamic. Underestimating actual grid cell sizes will result in a “waffle”-like grid. Iteratively change the grid cell sizes by 10ths until grid lines disappear
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10.8 meter increment The conversion to raster is complete! Now a range of spatial data analyses can be conducted.
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