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X-ray Neutron Electron
Diffraction X-ray Neutron Electron
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Diffraction An atom in space will elastically scatter X-rays as a function of angle. It will behave as a point source, but the intensity will decrease with angle. The intensity is calculated from theoretical wave functions for the electron distribution and given as a polynomial expression called the scattering factor (f ).
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Diffraction
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X-Ray Diffraction Atoms separated by distance d will scatter in phase when the path length difference is an integral number of wavelengths. Path length difference B-C-D = nl nl = 2d sin q
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Diffraction Fhkl = square root of integrated intensity.
Intensities can be calculated knowing the position and scattering characteristics of each atom. Fhkl = square root of integrated intensity. fj = scattering of atom j at angle 2q Atom j located at fractional coordinates xj, yj, zj.
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Structure Factors The structure factor, F, is the square root of the measured integrated intensity.
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Structure Factors
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Structure Factors If, for every atom, j, at (xj, yj, zj), there is an identical atom at (-xj, -yj, -zj), The imaginary term in the equation is zero.
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Systematic Extinction
If, for every atom, j, at (xj, yj, zj), there is an identical atom at (1/2+xj, 1/2+yj, 1/2+zj), (body centering) The structure factor is zero for h + k + l = 2n+1 (h+k+l odd) for all hkl So systematic extinction of structure factors tells us which symmetry operators are present
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Systematic Extinction
Lattice centering Operations For all hkl F: hkl all even or all odd I: h+k+l = 2n A: k+l = 2n B: h+l = 2n C: h+k = 2n
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Systematic Extinction
Glide planes a glide normal to c: for hk0, h = 2n b-glide normal to c: for hk0, k = 2n n-glide normal to c: for hk0, h+k = 2n a-glide normal to b: for h0l, h = 2n c-glide normal to b: for h0l, l = 2n n-glide normal to b: for h0l, h+l = 2n b-glide normal to a: for 0kl, k = 2n c-glide normal to a: for 0kl, l = 2n n-glide normal to a: for 0kl, k+l = 2n
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Reciprocal Lattice The reciprocal lattice is a mathematical construct of points each corresponding to a given Miller index, hkl. It is a three dimensional lattice where the nodes are diffracted intensities and the spacing between points is inversely proportional to the unit cell parameters in real space.
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Reciprocal Lattice Reciprocal axes are denoted For Orthorhombic
a*, b*, c*, a*, b*, g* For Orthorhombic a* = 1/a ; b* = 1/b ; c* = 1/c Scale is arbitrary
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Wadsleyite Imma hk0 a = 5.7Å b = 11.5 Å c = 8.3 Å
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Four-Circle Diffractometer
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Four-Circle Diffractometer
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Four-Circle Diffractometer
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Diffraction Experiment
Mount Crystal (~100mm) Rotation photograph Index and obtain matrix Refine unit cell parameters (1/104) Measure Intensities ( ) Determine or refine atom position and displacement parameters
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