Download presentation
Presentation is loading. Please wait.
Published byWerner Beutel Modified over 6 years ago
1
Research Techniques Made Simple: Bacterial 16S Ribosomal RNA Gene Sequencing in Cutaneous Research
Jay-Hyun Jo, Elizabeth A. Kennedy, Heidi H. Kong Journal of Investigative Dermatology Volume 136, Issue 3, Pages e23-e27 (March 2016) DOI: /j.jid Copyright © 2016 The Authors Terms and Conditions
2
Figure 1 Schematic illustration of basic workflow for skin 16S rRNA gene-based sequencing. Adapted and modified with permission from Kong (2011). Journal of Investigative Dermatology , e23-e27DOI: ( /j.jid ) Copyright © 2016 The Authors Terms and Conditions
3
Figure 2 16S rRNA gene structure illustrating variable (blue, V1–V9) and conserved (dark gray) regions. Common regions (amplicons) for next-generation sequencing-based microbial community profiling are depicted below. Journal of Investigative Dermatology , e23-e27DOI: ( /j.jid ) Copyright © 2016 The Authors Terms and Conditions
4
Figure 3 Skin microbial structure is closely correlated with host status. (a) Relative abundance (phylum and order level) for wild-type (WT) and hypomorphic matriptase (St14hypo/−) mice. Adapted from Scharschmidt et al. (2009). (b) Relative genus (upper) and Staphylococcus species (lower) abundance in the antecubital and popliteal creases for atopic dermatitis status: baseline, flare (with or without intermittent treatment), and postflare. Each bar represents individual patients. Adapted with permission from Kong et al. (2012). Journal of Investigative Dermatology , e23-e27DOI: ( /j.jid ) Copyright © 2016 The Authors Terms and Conditions
Similar presentations
© 2024 SlidePlayer.com. Inc.
All rights reserved.