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Master Thesis presentation BioMechanical Engineering
By: Joris Moerkerken Supervisors: Prof. dr. ir. Fred van Keulen Prof. dr. Huib Simonsz Dr. ir. Matthijs Langelaar Welcome to my thesis presentation. I performed a thesis study for my master in biomechanical engineering and I will present my findings for you today. In Biomechanics we investigate the mechanical behavior of biological systems. For example, the mechanics of a knee or a shoulder. -Click- 26/12/2018 By Joris Moerkerken
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This movie shows the rotation of the human eye
This movie shows the rotation of the human eye. The eye is suspended in the orbit (oogkas). Unlike other body parts were bones, muscles and cartilage regulate motion, the eye is suspended on fat. Point: muscles, nerve, eye, orbit and fat. The soft tissue interaction in the orbit is able to move the eye very accurately up to 900°/second. My study was devoted to the mechanical behavior of this complex system. -click- 26/12/2018 By Joris Moerkerken
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Organization Background Problem statement Methods Results
A three dimensional model A two dimensional model approach Results Critical areas Conclusions This presentation will take approximately one half an hour. First i will provide background information on the motivation of this research. I will define my problem statemenent. In the methods i will talk about how i started to solve the problem. Then i will tell how the first approached failed and that a different was needed. Then i will talk about the results of this new approach, point out the critical areas of the problem. Finally i will end this presentation with the conclusions. -Click- 26/12/2018 By Joris Moerkerken
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Background 26/12/2018 By Joris Moerkerken
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Background As you might have seen in the movie, the eye slides on the fat. This sliding is possible because of a fluid interface between the fat and the sclera, the hard outer shell of the eye. -click- 26/12/2018 By Joris Moerkerken
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Background Why model these structures?
Insight in functionality of anatomical structures. Mechanical properties of these structures could help in surgical interventions. 26/12/2018 By Joris Moerkerken
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Background Mechanical models of the human eye were created in the past. This was always done in systems with 3 degrees of freedom. 26/12/2018 By Joris Moerkerken
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Background In reality eye rotation is not about a single point.
The eye can translate and rotate on the fat, this gives the eye 6 degrees of freedom. Modeling such a complex mechanical structure can be done with the finite element (FE) method. FE is used to predict deformation and stresses in complex structures in many fields. FE is used in the car industry, in the modeling of ships, planes. And more recently it also used in biomechanics, to model for example bone mechanics. 26/12/2018 By Joris Moerkerken
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Background How to built an FE model in 5 steps:
1: Obtain structure surface 2: Subdivide surface into cubes or elements The whole system of elements is called: mesh 26/12/2018 By Joris Moerkerken
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Background 3: Each element needs material properties
4: The whole system of elements needs boundary conditions (BC’s). 26/12/2018 By Joris Moerkerken
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Background 5: Apply conditions for a simulation 26/12/2018
By Joris Moerkerken
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Background This was first done in 2001 by van den Bedem and Schutte.
limited rotation (15°) real eye can go up to 50°. Later attempts were done to improve the model: Beerepoot et al. 2006, muscle model. Goudsmit et al. 2009, detailed anatomical structures. No improvement on rotation performance, still maximum 15°. It was not clear what caused this limited rotation. 26/12/2018 By Joris Moerkerken
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Summary so far Eye is suspended on the orbital fat.
Modeling the mechanics of the eye in the orbit shows functionality of anatomical structures. A mechanical model of the orbit was made in 2001 with the FE method. This model and later models did allow for maximum 15° rotation of the eye. 26/12/2018 By Joris Moerkerken
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Problem statement The goal of this study is to identify and analyze the problems in the finite element model of orbital mechanics in order to be able to simulate full eye rotations. 26/12/2018 By Joris Moerkerken
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Methods Find causes of the limited rotation in the 3D model.
How to do this in a 3D model? Later in this presentation it will become clear why this model is so complex. 26/12/2018 By Joris Moerkerken
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Problem: what is happening?
I can just click now and show you the 3D model, however keep in mind that this model took former researchers about one year to create. I was able to recreate it with their help and was then faced with the task to make it work. You can see that the eye rotates (point) because the muscle contracts (point). -click- 26/12/2018 By Joris Moerkerken
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Problem: what is happening?
What stops the simulation? In FE a simulation conists of several calculation steps. A solution is approximated, no exact solution exists If a simulation step convergece, the simulation can proceed with the next step. If a step does not converge, the simulation is stopped. In this model the simulation stopped because convergence could not be reached. 26/12/2018 By Joris Moerkerken
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A new modeling approach
Three dimensional analysis is extremely time consuming A lack of insight and overview of the model leads to an uncontrollable situation A controllable situation is needed to solve the problems Back to basic! Comparable with air crash investigation. After a struggle of a few months, you can imagine that this situation is very depresing ;) -Click- 26/12/2018 By Joris Moerkerken
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Methods One way to simplify the situation is to go back to 2D.
Faster simulations One plane to analyse instead of 3D environment A more insightful situation is formed. Plak uit het oog. Twee spieren voor de rotatie, de zenuw en het vet. 26/12/2018 By Joris Moerkerken
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How to built a 2D model The 5 steps: 1: Obtain structure surface
MRI slice Overlay curves on the surfaces Leg mri plak onder 26/12/2018 By Joris Moerkerken
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How to built a 2D model 2: Create mesh 3: Assign material properties
26/12/2018 By Joris Moerkerken
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How to built a 2D model 4: Apply boundary conditions
Orbital wall, muscle back ends and the optic nerve back end are fixed. Important determinant in model: contact between structures. 26/12/2018 By Joris Moerkerken
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How to built a 2D model Sliding between structures Fat and eye
Fat and orbital wall Fat and muscles Fat and optic nerve Muscles and eye Muscles and orbital wall We can model this with a contact algorithm which I will explain in a later slide 26/12/2018 By Joris Moerkerken
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How to built a 2D model 5: simulate eye rotation Contract one muscle
Relax the antagonist muscle 26/12/2018 By Joris Moerkerken
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Recap The 3D FE model was unsuited to identify problems
A 2D FE approach was thought to create a controllable base to find problems A 2D FE model was built A rotation can now be simulated 26/12/2018 By Joris Moerkerken
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2D simulations Rule out causes of problems:
First rotate the eye about a fixed point excluding the fat Add structures to see where problems start to occur 26/12/2018 By Joris Moerkerken
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2D model: Muscle contraction
Simulate eye rotation about a fixed point. No problems were found in this simulation. 26/12/2018 By Joris Moerkerken
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2D model: eye rotation with two muscles
Simulate eye rotation about a fixed point. No problems here either. 26/12/2018 By Joris Moerkerken
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2D model: eye rotation on fat
Simulate eye rotation on the fat. To rule out problems with the fat. A finer mesh was chosen, adequate for this problem? Rotation on the fat seems problematic. 26/12/2018 By Joris Moerkerken
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2D model: eye rotation on fat including the optic nerve
Problems were observed. 26/12/2018 By Joris Moerkerken
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Problems in modeling the fat
Fat is almost incompressible Fat is highly inhomogeneous Mechanical behavior is different in each region 80% water 26/12/2018 By Joris Moerkerken
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Problems in modeling the fat
Incompressible material: No change in volume (isovolumetric) when compressed Results in overly stiff response of the element Results in too small displacement 26/12/2018 By Joris Moerkerken
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Results: four main problems
Distorted mesh Contact between structures is not simulated correctly Penetration of elements Loss of contact How to choose a correct mesh size Incompressible behavior of elements 26/12/2018 By Joris Moerkerken
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Results 2D model These problems cannot be solved one at the time, they relate to each other. This 2D model shows problems, the causes of these problems are still not found. For example: the contact algorithm that simulates the contact between structures uses information on the mesh size. 26/12/2018 By Joris Moerkerken
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Results 2D model Now it is time to look at the areas where the problems occur in order to find causes and possible solutions. Three critical areas Simulate focussed subtasks Even uitzoomen, dus eerst 3d toen 2d en nu inzoomen op de 2d gebieden 26/12/2018 By Joris Moerkerken
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Critical areas 1: Muscle attachment on the eye
2: Optic nerve attachment on the eye 3: Fat directly behind the eye 26/12/2018 By Joris Moerkerken
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Critical area (2) Optic nerve attachment on the eye
What happens in this area? Fat flows around the optic nerve as the eye rotates (Schaafsma 2010). 26/12/2018 By Joris Moerkerken
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Critical area (2) Optic nerve attachment on the eye
Is this flow behavior observed in the model? 26/12/2018 By Joris Moerkerken
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Critical area (2) Optic nerve attachment on the eye
Flow behavior not observed in the simulation. We do observe: 1: Highly distorted mesh: large deformations. 2: Penetration of elements occurs. 3: Bad incompressible behavior. 4: A gap is formed: lack of pressure gradients. 26/12/2018 By Joris Moerkerken
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Critical area (2) Optic nerve attachment on the eye
1: Highly distorted mesh, what happens here? Aspect ratio is negative, the simulation does not converge 26/12/2018 By Joris Moerkerken
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Critical area (2) Optic nerve attachment on the eye
1: Highly distorted mesh How to prevent bad aspect ratios? Remesh algorithm is employed: Creates a new mesh in the calculation step where a distorted mesh is formed. Remesh criteria: Based upon distorted mesh 26/12/2018 By Joris Moerkerken
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Critical area (2) Optic nerve attachment on the eye
2: Penetration problems, what happens here? Contact algorithm Searches for contact in an area around the elements. Creates ties between nodes. Looses contact if the seperation treshold is exceeded (e.g. positive reaction force) Show contact movie! 26/12/2018 By Joris Moerkerken
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Critical area (2) Optic nerve attachment on the eye
2: Penetration problems Sensible for stepsize! Nodes are searched at a certain distance of the element side. This distance is smaller than 5% of the smallest element side. If an element has a larger displacement in one step compared to this distance, no contact is detected: penetration occurs. 26/12/2018 By Joris Moerkerken
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Results 2D model 3: Bad incompressible behavior: It was found that a specialized group of elements called “Herrmann elements” can cope with incompressible material behavior. 26/12/2018 By Joris Moerkerken
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Results 2D model 4: A gap is formed No adequate solution was found.
26/12/2018 By Joris Moerkerken
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Critical area (2) Optic nerve attachment on the eye
Proposed solutions: Contact problem: Adaptive stepsize: link stepsize to deformation fields, this prevents penetration Distorted mesh problem: Remesh the original mesh when the mesh gets distorted, this prevents distortion Herrmann elements for incompressible behavior 26/12/2018 By Joris Moerkerken
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Critical area (2) Optic nerve attachment on the eye
Performance improved. No mesh distortion No penetration Still a gap... 26/12/2018 By Joris Moerkerken
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Back to our original 2D model
Incorperate solutions that were found in the analyses of the critical areas shows: Improved simulation: No distorted mesh No penetration Allow for rotations up to 30° 26/12/2018 By Joris Moerkerken
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Conclusions 3D model unsuited to identify problems
Problems could be found in the 2D model Split up this complex modeling task in more focused subtasks shows causes of problems 26/12/2018 By Joris Moerkerken
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Conclusions Better performance of the model is expected if
Adaptive stepping procedure is used Remeshing of distorted mesh is used Herrmann elements for incompressible behavior are used 26/12/2018 By Joris Moerkerken
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Conclusions There is however still the problem of lack of pressure gradient. The problem of gaps could not be solved adequately. FE simulations are specially created to model solid structures. Fat seems to behave more like a fluid. 26/12/2018 By Joris Moerkerken
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Conclusions The elements representing the orbital fat impeed the large deformations occuring in the orbit and leave gaps in the mesh: This raises the question whether the orbital fat could be modeled properly with FE. 26/12/2018 By Joris Moerkerken
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