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Effect of probiotics in prevention of atopic dermatitis is dependent on the intrinsic microbiota at early infancy  Ekaterina Avershina, PhD, Raul Cabrera.

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Presentation on theme: "Effect of probiotics in prevention of atopic dermatitis is dependent on the intrinsic microbiota at early infancy  Ekaterina Avershina, PhD, Raul Cabrera."— Presentation transcript:

1 Effect of probiotics in prevention of atopic dermatitis is dependent on the intrinsic microbiota at early infancy  Ekaterina Avershina, PhD, Raul Cabrera Rubio, PhD, Krister Lundgård, MSc, Gaspar Perez Martinez, PhD, Maria Carmen Collado, PhD, Ola Storrø, MD, PhD, Torbjørn Øien, MD, PhD, Christian Kvikne Dotterud, MD, PhD, Roar Johnsen, MD, PhD, Knut Rudi, PhD  Journal of Allergy and Clinical Immunology  Volume 139, Issue 4, Pages e8 (April 2017) DOI: /j.jaci Copyright © 2016 American Academy of Allergy, Asthma & Immunology Terms and Conditions

2 Fig 1 Divergence in microbiota between the categories (PN, PA, NN, and NA) at 10 days. Both weighted (quantitative, account for abundance) and unweighted (qualitative, considering presence or absence) Unifrac distances (first and second values) are shown for the corresponding branches. Journal of Allergy and Clinical Immunology  , e8DOI: ( /j.jaci ) Copyright © 2016 American Academy of Allergy, Asthma & Immunology Terms and Conditions

3 Fig 2 Prevalence of OTU 46 B dentium for high (A) and detection (B) levels. The prevalence data are represented as Venn diagrams, comparing the observed distribution with that expected under the null hypothesis with no associations of OTU 46. Statistical testings were based on permutations. Journal of Allergy and Clinical Immunology  , e8DOI: ( /j.jaci ) Copyright © 2016 American Academy of Allergy, Asthma & Immunology Terms and Conditions

4 Fig E1 OTUs important for explaining the association between the PA group at 10 days and the microbiota by partial least squares discriminant analysis. VIP, Importance of each OTU in fitting both OTUs and PA groups for partial least square discriminant analysis. Journal of Allergy and Clinical Immunology  , e8DOI: ( /j.jaci ) Copyright © 2016 American Academy of Allergy, Asthma & Immunology Terms and Conditions

5 Fig E2 Number of occurrences of OTUs above the different thresholds. The stippled line at 10% represents the lower log-linear range for the high-abundant OTUs. This threshold was therefore used to define high high-abundant OTUs. Journal of Allergy and Clinical Immunology  , e8DOI: ( /j.jaci ) Copyright © 2016 American Academy of Allergy, Asthma & Immunology Terms and Conditions

6 Fig E3 Prevalence of OTU46 (B dentium) at detection (A), 10% level (B), and its average abundance (C) in stool samples from children born vaginally or by C-section, and in stool samples from their mothers. Journal of Allergy and Clinical Immunology  , e8DOI: ( /j.jaci ) Copyright © 2016 American Academy of Allergy, Asthma & Immunology Terms and Conditions

7 Fig E4 BH-FDR–corrected P values for detected (A) and high-level (B) OTUs. Fig E4, A and B, Tests for all age categories were included in the FDR correction. A, Singletons were excluded for detection. B, A relative abundance of more than 10% was used as a threshold for determining high levels. Journal of Allergy and Clinical Immunology  , e8DOI: ( /j.jaci ) Copyright © 2016 American Academy of Allergy, Asthma & Immunology Terms and Conditions

8 Fig E5 Prevalence of OTU 87 for mothers 3 months postdelivery (A) and OTU 104 for 10-day children (B). The prevalence data are represented as Venn diagrams, comparing the observed distribution with that expected under the null hypothesis with no associations of OTUs. Statistical testings were based on permutations. Journal of Allergy and Clinical Immunology  , e8DOI: ( /j.jaci ) Copyright © 2016 American Academy of Allergy, Asthma & Immunology Terms and Conditions


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