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Published byChad Hubbard Modified over 6 years ago
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Incorporating changing population size into the coalescent
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Computation of SNPs in the public human genome data
SNPs - Heritable &variable landmarks useful as markers in human genome (disease mapping, population structure). Overlaps of large-insert genome clones - nearly 500,000 SNPs present. Studied distribution of marker density observed at different overlap length scales under a model of recombination and population size change. History of population sequence - bottleneck pattern.
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Population Density Distribution in Different Epochs
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Modeling Marker Density Distributions
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Differential demographic history in three large world populations.
Studied the SNP allele frequency in different populations. Derived a (simple), closed mathematical formulation. These results when used in model fitting experiments revealed significant population-specific difference. European and Asian - bottleneck-shaped history. 5. African-American - moderate but uninterrupted population expansion.
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Folded spectra under stationary
History, at various sample sizes Allele Frequency Spectra predicted under competing scenarios of population history.
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Model Fitting to folded AFS in Different Population Groups
European Asian African - American
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