1. ADV-1 downstream targets identified by ChIP-seq and RNA-seq are enriched for ccgs.
ADV-1 downstream targets identified by ChIP-seq and RNA-seq are enriched for ccgs. (A) Venn diagram comparing predicted ADV-1 direct target genes identified by ChIP-seq to light-regulated genes and predicted and known ccgs. (B) GO and FunCat analyses of clock-controlled and ADV-1-bound genes. (C) The 268 genes that are both indirect targets of ADV-1 based on RNA-seq and are predicted or known ccgs (Table S10) were analyzed using GO and FunCat and the most highly significant enriched categories are represented (P ≤ 0.05). The plots are as described in Figure 2.
Rigzin Dekhang et al. G3 2016;7:
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