1. ExPASy (Expert Protein Analysis System)
David Shiuan
Department of Life Science,
Institute of Biotechnology and Interdisciplinary Program of Bioinformatics
National Dong Hwa University

5. Proteomics and sequence analysis tools
Proteomics [PeptIdent, PeptideMass, ...]
DNA -> Protein [Translate]
Similarity searches [BLAST]
Pattern and profile searches [ScanProsite]
Post-translational modification and topology prediction
Primary structure analysis [ProtParam, pI/MW, ProtScale]
Secondary and tertiary structure prediction [SWISS-MODEL, Swiss-PdbViewer]
Alignment [T-COFFEE, SIM]
Biological text analysis

35. Potential O-GlcNAC

39. SUMO (Small Ubiquitin-Like Modifier)
SUMO is member of ubiquitin and ubiquitin-like superfamily
Most SUMO proteins contain tetrapeptide motif B-K-x-D/E, where B is a hydrophobic residue, K is lysine and D/E is an acidic residue
Substrate specificity is derived from ubc9 and the respective substrate motif

59. nnpredict Result