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Usutu virus infections in humans: a retrospective analysis in the municipality of Modena, Italy
A. Grottola, M. Marcacci, S. Tagliazucchi, W. Gennari, A. Di Gennaro, M. Orsini, F. Monaco, P. Marchegiano, V. Marini, M. Meacci, F. Rumpianesi, A. Lorusso, M. Pecorari, G. Savini Clinical Microbiology and Infection Volume 23, Issue 1, Pages (January 2017) DOI: /j.cmi Copyright © 2016 European Society of Clinical Microbiology and Infectious Diseases Terms and Conditions
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Fig. 1 Phylogenetic analysis. Maximum likelihood tree inferred from multiple nucleotide sequence alignment of partial NS5 gene sequences of USUV strains detected in this study. Option ‘Display only topology' was used for graphical representation of analysis. All homologous USUV sequences publicly available were recruited for analysis. Tree was built with MEGA6 [20] using K2+I (best DNA model) as substitution model. Branch support was assessed with 500 bootstrap replicates. Recent German USUV sequences included in analysis were provided with accession numbers. USUV, Usutu virus. Orange dots, German strains (2010–2014); red dots, blue squares and magenta diamonds, African lineages; purple dots, Central-European reference USUV strains; green triangles, sequences obtained in this study from humans, birds and insects. Clinical Microbiology and Infection , 33-37DOI: ( /j.cmi ) Copyright © 2016 European Society of Clinical Microbiology and Infectious Diseases Terms and Conditions
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