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Published byBarnaby Morrison Modified over 5 years ago
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VACS Data Build Process of Cleaning and versioning of data sources
Creating faster and efficient data access for analysis Provide a single, secure and centralized location for all data sources.
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Administrative (Austin) data (1997-2006)
Survey (full study baseline,) no follow-ups yet right? FU1,2,3) PBM (October 1998 – July 2005) ICR (fiscal year , HIV +) Pharmacy, Labs, Diagnoses Enrollment (demographics, consent) VISTA EMR direct from sites
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VACS Data Build 1 Goals: Accurate clean data Centralized Documented
Correct enrolled full study – documented consent and completed baseline survey Data integrity – to prevent duplication and redundancy Centralized Documented Secure
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VACS Data Build Status Data in SQLServer Data in SAS, STATA, Text
Master “Enrolled” Baseline surveys, cause of death, TLFB Admin Data – ICR, Austin, PBM Vista – labs (06) Data in SAS, STATA, Text VACS3,5 surveys, TLFB SAS cleaning code VISTA other - such as clean site labs Documentation – Metadata for survey questions, choices, lab codes, med. Codes (ARV), diagnostic codes
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What does this mean? Faster turn-around of data requests will be possible - Main coordinating staff will have access to data (not just MS) - Data will be linkable for ease of combining various data sources Easy tracking of methods for papers, abstracts and presentations
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What does this mean? BUT—data is ‘clean’ at the row/record level not subject Programming still required to create data sets for requests such as: - selecting specific labs, pharmacy data for subjects within +- of enrollment dates - comorbidities (ICDs) at different times – Baseline, FU’s
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Subsequent Builds Data – normalized and cleaned
Surveys FU1, FU2, FU3 Other such as Vista/EMR site data Automated load/extract processes Security enhancements Stored objects for queries and statistical analysis Web interfaces for data analysis and requests using metadata Documentation on data sources such as Austin, PBM
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Credits The VACS team for their functional and technical input.
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