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BLASTN comparison of the R478 and pSSE ATCC plasmids.

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Presentation on theme: "BLASTN comparison of the R478 and pSSE ATCC plasmids."— Presentation transcript:

1 BLASTN comparison of the R478 and pSSE ATCC-43845 plasmids.
BLASTN comparison of the R478 and pSSE ATCC plasmids. The backbone for R478 is highly conserved in pSSE ATCC The majority of differences between the two plasmids reside between the tellurite resistance island and CHASRI (copper homeostasis and silver resistance island). The lack of any known antibiotic resistance genes, such as aphA (kanamycin) or cat (chloramphenicol), on pSSE ATCC is also noted. The integration site for Tn10 with tetracycline resistance is in BFF41_25185 in pSSE ATCC Heavy metal resistance genes (purple), antibiotic resistance genes (teal), TLPQC genes (red), transposase genes (blue), CHASRI genes (silver), and rep (magenta) and the mercury resistance (mer), methylase (dam), tellurite resistance (ter), arsenic resistance (ars), and replicase (rep) genes are indicated. Scott V. Nguyen et al. mSystems 2017; doi: /mSystems

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