1. Example of processed data visualized with “Peak Browser” of ChIP‐Atlas
Example of processed data visualized with “Peak Browser” of ChIP‐Atlas ChIP‐Atlas peak‐call data for TRs around the mouse Foxa2 locus are shown in the IGV genome browser for settings of the “Peak Browser” Web page shown in Fig EV1C. Bars represent the peak regions, with the curated names of the antigens and cell types being shown below the bars and their color indicating the score calculated with the peak‐caller MACS2 (−log10[Q‐value]). Detailed sample information (yellow window) appears on placing the cursor over each bar. Clicking on the bars (asterisks) enables display of the alignment data (top) and detailed information about the experiments (Fig EV1D).
Shinya Oki et al. EMBO Rep. 2018;embr
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