1. Comparison of the global transcriptomes of nine EPEC isolates.
Comparison of the global transcriptomes of nine EPEC isolates. A circular plot of the log2-fold-change (LFC) values for genes that exhibited significant differential expression during exponential growth in DMEM compared to LB is shown. The outermost track contains all of the significant LFC values for each of the indicated nine EPEC isolates. The inner tracks are numbered to correspond to the same number of each EPEC isolate in the outermost track. The phylogroup that each EPEC isolate belongs to is indicated in parentheses following the isolate designation. For example, 5-B171 (B1) indicates that data tracks containing B171 data are labeled track 5 in all of the comparisons, while B171 is the isolate designation and B1 the phylogroup designation. The inner tracks contain the LFC values of genes of another of the EPEC isolates belonging to the same LS-BSR gene cluster as the genes in the outermost reference track. The genes that were not identified in the other EPEC isolates or did not exhibit significant differential expression are absent from the inner tracks.
Tracy H. Hazen et al. mSystems 2017; doi: /mSystems