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Use DAVID ( to convert the mouse SwissProt IDs to LocusLink

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Presentation on theme: "Use DAVID ( to convert the mouse SwissProt IDs to LocusLink"— Presentation transcript:

1 Use DAVID (http://apps1. niaid. nih
Use DAVID ( to convert the mouse SwissProt IDs to LocusLink. Use either DAVID 2.0 of DAVID 2.1 beta, I used 2.1 beta.

2 Click “Gene Accession Conversion”

3 In step 1, either browse for a text file containing only the IDs or copy-paste the IDs into the box on the right. In step 2, set Convert From as “Not Sure” and set Convert To as “ENTREZ_GENE_ID” Then click Convert

4 2 1 Click the icon under Convert All next to UNIPROT_ACCESSION
Then right-click the link and select “Save target as”

5 Please note that it is possible for some SwissProt IDs to map to multiple LocusLink IDs.

6 When you upload the file to MetaCore, make sure to set the SwissPro/Trembl column to “ignore” and to set the LocusLink column to “LocusLink ID”


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