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ANSWERS FOR QUIZ
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Set-1. Answers to Bacterial gel
1.760 2. 245 3. 16 spots 4.142/760 x 100 i.e.18.68% = 45. 6. 20 spots 7. 20/760 x 100 i.e.2.63% = 35. 9.(i) Spot ID: 2082 pI : ~4.53 Mol. weight : 24.9 kDal (ii) Spot ID: 1999 pI : ~4.90 Mol. weight : kDal
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Supportive material
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1. Project Summary: Groups Control(1 image)
Project Name Bacterial sample 2D-Gels for Analysis. Project Creation Date ……………… Author ………………… Description Bacterial sample Control vs Drug treated Groups Control(1 image) 780spots transferred from fused image 96 spots cancelled Drug Treated(1 image) 780 spots transferred from fused image Vector Matching :245
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3.Figure showing Molecular weight to pI
pI index 85 4.00 4.25 4.50 4.75 5.00 5.25 5.50 5.75 6.00 6.25 6.50 6.75 7.00 80 75 70 65 60 55 50 45 40 35 30 25 20 15 10 5 Molecular weight (kDal) pI : ~4.53 Mol. weight : 24.9 kDal pI : ~4.90 Mol. weight : kDal
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4.1.Differential expression : Up regulation
No. of folds (and above) No.of spots 2 142 4 71 6 36 8 26 10 16 12 15 Up regulation x Folds or above No. of spots showing up regulation
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4.2.Differential expression : Down regulation
No. of folds (and above) No.of spots 2 174 4 47 6 20 8 12 10 15 1 Down regulation x Folds or above No. of spots showing up regulation
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Set -1. Answer of Serum sample
spots 2. 109 3. 16 spots 4. 69/349 x 100 i.e.19.77% = 17 6. 28 spots 7. 48/349 x 100 i.e % = 55 9.(i) Spot ID: 2082 pI : 5.28 Mol. weight : 44.8 kDal (ii) Spot ID: 1999 pI : ~5.26 Mol. weight : kDal
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Supportive material
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Project Summary: Groups Control(1 image) Control - Healthy person
Project Name Serum sample 2D-Gels for Analysis. Project Creation Date ………………………………… Author ………………. Description Healthy vs diseased patient Groups Control(1 image) Control - Healthy person 349spots transferred from fused image 97 spots cancelled Diseased (1 image) P.falciparum diseased serum sample 349 spots transferred from fused image Vector Matching : 109
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3.Figure showing Molecular weight to pI
pI index 85 4.00 4.25 4.50 4.75 5.00 5.25 5.50 5.75 6.00 6.25 6.50 6.75 7.00 80 75 70 65 60 55 50 45 40 35 30 25 20 15 10 5 Molecular weight (kDal) pI : 5.28 Mol. weight : kDal pI : 5.26 Mol. weight : kDal
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Differential expression : Up regulation
No. of folds (and above) No.of spots 2 69 3 47 4 39 5 33 8 21 10 16 15 20 25 50 75 1 Up regulation x Folds or above No. of spots showing up regulation
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4.2.Differential expression : Down regulation
No. of folds (and above) No. of spots 2 83 3 48 4 37 5 28 7 13 10 11 15 30 Down regulation x Folds or above No. of spots showing up regulation
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