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BioRDF Task Force
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BioRDF Activities Explore the effectiveness of current tools for making data available as RDF/OWL Build a life sciences demo that spans from bench to bedside using RDF/OWL to help scientist better understand the value of the Semantic Web Document our finding to help accelerate the adoption of the Semantic Web by others
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Tool Assessment
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Life Sciences Demo Created a knowledge base for Alzheimer’s Disease
Details during Alan’s talk
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Presentations WWW2007 Demo ISMB 2007 Demo
ISMB BioOntology SIG Poster 2007 Society for Neuroscience Poster Nov 2007 Bridging Pharma and IT Drug Discovery Technology of Innovative Therapeutics Bio-IT World Modern Drug Discovery and Development Summit Massachusetts Biotechnology Panel eScience Institute; RDF, Ontologies and Meta-Data Workshop Systems Biology Conference Semantic Web Gathering
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Documents SenseLab conversion Guide for KB URI note
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BioRDF Participants John Barkley (NIST), Olivier Bodenreider (NLM), Bill Bug (Drexel), Kei Cheung (Yale University), Tim Clark (MGH), Don Doherty (Brainstage Research), Michel Dumontier (Carlton University), Ray Hookaway (HP), Vipul Kashyap (Partners), June Kinoshita (AlzForum), Joanne Luciano (Mitre), Scott Marshall (University of Amsterdam), Eric Neumann (Clinical Semantics), Eric Prud’hommeaux (W3C), Daniel Rubin (Stanford University), Jonathan Rees (Creative Commons), Alan Ruttenburg (Creative Commons), Matthias Samwald (Medical University of Vienna), Andy Seaborne (HP), Karen Skinner (NIH), Susie Stephens (Lilly), Elizabeth Wu (AlzForum).
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Summary Brought domain experts together
Learnt about Semantic Web technologies and tools Created a contiguous ontology Working on documents, e.g. URI note
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