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Col max1-1 max3-9 max4-11 Atd14-1 max2-4 ein2-5 ein3-1 eil1-3 0 day

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Presentation on theme: "Col max1-1 max3-9 max4-11 Atd14-1 max2-4 ein2-5 ein3-1 eil1-3 0 day"— Presentation transcript:

1 Col max1-1 max3-9 max4-11 Atd14-1 max2-4 ein2-5 ein3-1 eil1-3 0 day 7days A B * * * * * * * * Col C Supplemental Figure S1. Quantitative analysis of senescence parameters in strigolactone biosynthesis mutants. A, Phenotype of strigolactone biosynthesis mutants incubated in the light. The 8th leaf from the top was incubated in the light for 7 days. The lower panel shows changes in SPAD values over time. B, Changes in Fv/Fm values obtained from the 8th leaf incubated in the dark. Fv/Fm values of 7 days after dark treatment were compared with those of Col by using Student’s t-test (*, p < 0.05; **, p < 0.01). C, Changes in membrane ion leakage over time during dark incubation, for which the 11th leaf was used. A–C; Bars indicate standard error (n = 6).

2 A 5’ 3’ kai2-3 B * * Ler kai2-3 kai2-3 C Ler kai2-3 8th 9th 10th 11th 12th D Ler kai2-3 Supplemental Figure S2. Phenotype of kai2 in dark-induced senescence. A, Structure of the kai2-3 allele. Open boxes and horizontal bars indicate exons and introns, respectively. The triangle shows the Ds transposon insertion. B, Hypocotyl length of Ler and kai2-3 (Ler background) germinated under dim red light for 4 days. Hypocotyl length of kai2-3 is longer than that of Ler at 1% level by Student’s t-test, suggesting that kai2-3 is a loss-of-function mutant. Bars indicate standard error (n = 15). C, Leaves of Ler and kai2-3 were incubated in the dark for 6 days. D, Changes in SPAD values over time of the 8th leaf during 7 days of dark incubation. Bars indicate standard error (n = 7). Student’s t-test indicated that no statistical difference was observed between Ler and kai2-3 leaves in the same day during dark incubation.

3 A B C * * * * * Relative mRNA levels *
Col Col max4-11 max2-4 ein3-1 eil1-3 C * * Relative mRNA levels MAX3 MAX4 MAX1 AtSGR1 * * * * Presenescent Senescing Senescing Fully senescent Presenescent Fully senescent Supplemental Figure S3. Natural senescence of strigolactone biosynthesis mutants. A, Delayed-senescence phenotype of max4-11 in 10-week-old (28 days after bolting) plants grown under long-day conditions. B, SPAD values of leaves at 28 days after bolting, where the 11th leaf at bolting was used for measurement. Bars indicate standard error (n = 5). C, qRT-PCR analysis of transcript levels of strigolactone biosynthesis genes in naturally senescent leaves. Pre-senescent: entirely green; senescing: yellow leaf tip; fully senescent: entirely yellow leaf. Leaves were collected from 10-week-old Col plants (grown under short-day conditions for 4 weeks and long-day conditions for 6 weeks). Transcript levels are relative to that in fully senescent Col leaves. ACT8 was used as a reference. Bars indicate standard error (n = 4). mRNA levels were statistically compared with that of pre-senescent leaves by using Student’s t-test (*, p < 0.05).

4 A Ethylene Air a a ab ab ab b c d Col B Ethylene Air Ethylene Air Supplemental Figure S4. Ethylene sensitivity of strigolactone biosynthesis/strigolactone-insensitive and ethylene-insensitive mutants in leaf senescence. A, Chlorophyll content of strigolactone biosynthesis and strigolactone-insensitive mutants treated with or without ethylene in the light for 7 days. Solid and open bars indicate air- and ethylene-treated leaves, respectively. SPAD values of ethylene-treated leaves were statistically compared by using Tukey’s multiple comparison method. Data indicated with the same letter are not significantly different (p < 0.05). B, Changes in chlorophyll content over time in ein2-5 and ein3-1 eil1-3 during 20 days of ethylene treatment in the light. No statistical difference was observed between air- and ethylene-treated leaves in the same day after dark treatment by using Student’s t-test. The 8th leaf was used. Bars indicate standard error. n = 6 in A and n = 8 in B.

5 A B MAX4 AtSGR1 Relative mRNA levels MAX3 AtSGR1 Relative mRNA levels
Col max3-9 Col max3-9 B MAX3 AtSGR1 Relative mRNA levels Col max4-11 Col max4-11 Supplemental Figure S5. MAX3 and MAX4 expression in max4-11 and max3-9 during dark incubation. qRT-PCR analysis of transcript levels of MAX4 in max3-9 (A) and MAX3 in max4-11 (B). The 8th leaf of Col, max3-9, and max4-11 was incubated in the dark for 7 days. Transcript levels are relative to that in Col leaves at 7 DDT. ACT8 was used as a reference. Bars show standard error (n = 4).

6 Membrane ion leakage (%)
C a a a a a a Chlorophyll content (SPAD) b a a a c a b b a a a a a a Fv/Fm b a a b a a a Membrane ion leakage (%) a b a b a a a b b Supplemental Figure S6. Senescence parameters in ein3-1 eil1-3 leaves during a long dark incubation. A, Changes in SPAD values over time during dark incubation. B, Changes in Fv/Fm values over time during dark incubation. C, Changes in membrane ion leakage over time during dark incubation. A–C; Bars indicate standard error. n = 8 in A and C. n = 6 in B. Data indicated with the same letter are not significantly different by Tukey’s multiple comparison method (p < 0.05).

7 Days after dark treatment
MAX3 MAX4 Relative mRNA levels MAX1 AtSGR1 Col ein3-1 eil1-3 Col ein3-1 eil1-3 Days after dark treatment Supplemental Figure S7. qRT-PCR analysis of transcript levels of strigolactone biosynthesis genes in senescent ein3-1 eil1-3 leaves. Transcript levels are relative to that in Col leaves at 7 DDT. ACT8 was used as a reference. Bars indicate standard error (n = 4).

8 A B C ein3-1 eil1-3 Atd14-1 * * * * * * * * * * * Col ERF1 EBF2
Mock GR24 A 8th 9th 10th 11th 12th B Mock GR24 * Chlorophyll content (SPAD) * * * * * * Col ein3-1 eil1-3 Atd14-1 C * * * ERF1 * EBF2 Relative mRNA levels Col ein3-1 eil1-3 Col ein3-1 eil1-3 Supplemental Figure S8. Effect of strigolactone on senescence in lower leaves. A, Strigolactone promotes senescence of lower leaves in Col, but not in ein3 eil1, in the light. Lower (8–12th) leaves were incubated with or without 25 µM GR24 in the light for 7 days. B, Chlorophyll content in the lower leaves of Col and ein3-1 eil1-3 treated with or without 25 μM GR24 in the light. Solid and open bars indicate mock and GR24-treated leaves, respectively. Chlorophyll contents of mock and GR24-treated leaves of the same leaf position were statistically compared by using Student’s t-test. C, qRT-PCR analysis of transcript levels of ethylene-inducible genes in lower leaves of Col grown under the short-day condition. ERF1 and EBF2 are direct targets of EIN3. Student’s t-test revealed that ERF1 and EBF2 were significantly upregulated in the 12th leaf of Col but not in ein3-1 eil1-3. Transcript levels are relative to that in the 12th leaf of Col. ACT8 was used as a reference. Bars indicate standard error. n = 6 in B and n = 4 in C. *, p < 0.05; **, p < 0.01.

9 A max4-11 Col max4-11 7 Genomic DNA M B MAX4 ACT8 Supplemental Figure S9. Characterization of the max4-11 allele. A, Structure of the max4-11 allele. Open boxes and horizontal bars indicate exons and introns, respectively. The triangle shows T-DNA. B, Expression of MAX4 in the max4-11 mutant. Upper panel shows RT-PCR analysis of MAX4 using MAX4F (F) and MAX4R (R) as a primer pair. Lower panel shows expression of ACT8 as a reference. “0” and “7” indicate 0 and 7 DDT.

10 Supplemental Figure S10. Effect of strigolactone on Fv/Fm value
Supplemental Figure S10. Effect of strigolactone on Fv/Fm value. The 8th leaf from the top of Col plants were incubated in the light for 7 days with 25 μM GR24. No statistical difference was observed between mock and GR24-treated leaves by using Student’s t-test. n = 7

11 Supplemental Table 1. Primers for genotyping
Sequence max2-4 F  CGAGGCTTACACGGTTAGAT max2-4 R  CACAAATCGGCTCAATTGCC max4-11 F  GTAACTTCCCCAATGCTCTC max4-11 R  CAGAGAGGAGAAGTGTCTGA At d14-1 F  ACACCTCTCAGATCGCTGTT At d14-1 R  CAACGCATGCTCTTGTATCC eil1-3 F  TAAGTGTAAAGAAGGCGTCGA eil1-3 R  ATGACTCGGGATAAAGCTCC Lba1_SALK  TGGTTCACGTAGTGGGCCATCG DsLox_T-DNA  CCATGTAGATTTCCCGGACA max3-9 F  TTAACGGTCACTTGCAACGC max3-9 R  GAATTCCGAATCATACTCTGTA kai2-3 F  CCAACTATTCGAAGCCATCC kai2-3 R  AGTATAGCACAAGCACTCTTG

12 Supplemental Table 2. Primers for dCAPS analysis
Sequence Restriction Enzyme max1-1 F  GTGATGAACACAACAAGTGTC BlnI max1-1 R  CCTTTCTTGTGAAGAGGAGAAGCTGAGCCT ein2-5 F  TGTTCTTGATTGTTGATCACAG RsaI ein2-5 R  GAAGCCAAGCGGGTATTTCTATCTTCAGTA ein3-1 F  TTGGACCGACTCCTCATACC AluI ein3-1 R  TTGAGGCCACCAATCCTCTTTCCCATTAGC ctr1-1 F  CAAAAAGGCGTTAATCTGCTG EcoRI ctr1-1 R  CGTGCTGGCCTTCAATCGCGAGAGACCGAA

13 Supplemental Table 3. Primers for qRT-PCR or RT-PCR
Sequence Efficiency ACT8 F  AGCACTTTCCAGCAGATGTG 1.00 ACT8 R  GAAATGTGATCCCGTCATGG MAX1 F  GGCCCTATTTTCAGATTTCAG 0.96 MAX1 R  GAAGGAATGCTTCTGTTTGGA MAX3 F  AAAGACTTTTAACGGTCACTTG 0.99 MAX3 R  TTGAATTCCGAATCATACTCAC MAX4 F  GATGCTAGGATCGGGAGATT 0.97 MAX4 R  TGCACATATCCATCGCTCTC AtSGR1 F  GATTGTTCCCGTTGCAAGGT AtSGR1 R  AAGTCCTAGGGAGCGTTGAA SAG12 F  CTATTACAGGTTATGAGGATGT SAG12 R  AAACCACCTCCTTCAATTCCA ERF1 F  CGATCCCTAACCGAAAACAG 0.98 ERF1 R  TCCGATAGAATATTCCGGTGA EBF2 F  TCAGATTTAGTGGTGATGAAGA EBF2 R  GTAATATACACCGGGACAGC RT_ACT8 F  CAGCATGAAGATTAAGGTCGT    - RT_max4-11 F  GCACGAGCATGGTATGATAC RT_max4-11 R  CAACCATGCAAGCCATAAGG


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