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Basic Chemistry
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Matter and Energy Matter—anything that occupies space and has mass (weight) Energy—the ability to do work Chemical Electrical Mechanical Radiant
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Composition of Matter Elements—fundamental units of matter
96% of the body is made from four elements Atoms—building blocks of elements
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Atomic Structure Nucleus Protons (p+) Neutrons (n0) Outside of nucleus
Electrons (e-) Figure 2.1
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Atomic Structure of Smallest Atoms
Figure 2.2
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Identifying Elements Atomic number Atomic mass
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Isotopes and Atomic Weight
Have the same number of protons Vary in number of neutrons Figure 2.3
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Isotopes and Atomic Weight
Close to mass number of most abundant isotope Atomic weight reflects natural isotope variation
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Radioactivity Radioisotope Heavy isotope Tends to be unstable
Decomposes to more stable isotope Radioactivity—process of spontaneous atomic decay
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Molecules and Compounds
Molecule—two or more like atoms combined chemically Compound—two or more different atoms combined chemically Figure 2.4
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Chemical Reactions Atoms are united by chemical bonds
Atoms dissociate from other atoms when chemical bonds are broken
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Electrons and Bonding Electrons occupy energy levels called electron shells Electrons closest to the nucleus are most strongly attracted Each shell has distinct properties
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Electrons and Bonding Bonding involves interactions between electrons in the outer shell (valence shell) Full valence shells do not form bonds
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Inert Elements Atoms are stable (inert) when the outermost shell is complete How to fill the atom’s shells Shell 1 Shell 2 Shell 3
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Inert Elements Atoms will gain, lose, or share electrons to complete their outermost orbitals and reach a stable state Rule of eights Atoms are considered stable when their outermost orbital has 8 electrons The exception to this rule of eights is Shell 1, which can only hold 2 electrons
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Inert Elements Figure 2.5a
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Reactive Elements Valence shells are not full and are unstable
Tend to gain, lose, or share electrons Allow for bond formation, which produces stable valence Figure 2.5b
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Chemical Bonds Ionic bonds
Form when electrons are completely transferred from one atom to another Ions Charged particles Anions Cations Either donate or accept electrons PLAY Ionic Bonds
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+ – Ionic Bonds Na Cl Na Cl Sodium atom (Na) (11p+; 12n0; 11e–)
Chlorine atom (Cl) (17p+; 18n0; 17e–) Sodium ion (Na+) Chloride ion (Cl–) Sodium chloride (NaCl) Figure 2.6
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Chemical Bonds Covalent bonds
Atoms become stable through shared electrons Single covalent bonds share one pair of electrons Double covalent bonds share two pairs of electrons PLAY Covalent Bonds
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Examples of Covalent Bonds
Figure 2.7a
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Examples of Covalent Bonds
Figure 2.7b
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Examples of Covalent Bonds
Figure 2.7c
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Polarity Covalently bonded molecules Some are non-polar
Electrically neutral as a molecule Some are polar Have a positive and negative side Figure 2.8
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Chemical Bonds Hydrogen bonds Weak chemical bonds
Hydrogen is attracted to the negative portion of polar molecule Provides attraction between molecules
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Hydrogen Bonds Figure 2.9
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Patterns of Chemical Reactions
Synthesis reaction Atoms or molecules combine Energy is absorbed for bond formation Decomposition reaction Molecule is broken down Chemical energy is released PLAY Disaccharides
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Synthesis and Decomposition Reactions
Figure 2.10a
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Synthesis and Decomposition Reactions
Figure 2.10b
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Patterns of Chemical Reactions
Exchange reaction Involves both synthesis and decomposition reactions Switch is made between molecule parts and different molecules are made
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Patterns of Chemical Reactions
Figure 2.10c
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Biochemistry: Essentials for Life
Organic compounds Contain carbon Most are covalently bonded Example: Inorganic compounds Lack carbon Tend to be simpler compounds
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Important Inorganic Compounds
Water Most abundant inorganic compound Vital properties High heat capacity Polarity/solvent properties
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Important Inorganic Compounds
Salts Easily dissociate into ions in the presence of water Vital to many body functions Include electrolytes which conduct electrical currents
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Dissociation of a Salt in Water
Figure 2.11
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Important Inorganic Compounds
Acids Release hydrogen ions (H+) Are proton donors Bases Release hydroxyl ions (OH–) Are proton acceptors Neutralization reaction Acids and bases react to form water and a salt
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pH Measures relative concentration of hydrogen ions pH 7 = neutral
pH below 7 = acidic pH above 7 = basic Buffers—chemicals that can regulate pH change Figure 2.12
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Important Organic Compounds
Carbohydrates Contain carbon, hydrogen, and oxygen Include sugars and starches Classified according to size Monosaccharides Disaccharides Polysaccharides
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Carbohydrates PLAY Disaccharides Figure 2.13a–b
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Carbohydrates PLAY Polysaccharides Figure 2.13c
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Carbohydrates Figure 2.14
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Important Organic Compounds
Lipids Contain carbon, hydrogen, and oxygen Carbon and hydrogen outnumber oxygen Insoluble in water
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Lipids Common lipids in the human body Neutral fats (triglycerides)
Found in fat deposits Composed of fatty acids and glycerol Source of stored energy PLAY Lipids
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Lipids Figure 2.15a
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Lipids Common lipids in the human body (continued) Phospholipids
Steroids
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Lipids Figure 2.15b
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Lipids Cholesterol The basis for all steroids made in the body
Figure 2.15c
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Important Organic Compounds
Proteins Made of amino acids Contain carbon, oxygen, hydrogen, nitrogen, and sometimes sulfur Figure 2.16
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Proteins Account for over half of the body’s organic matter
Provide for construction materials for body tissues Play a vital role in cell function
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Proteins Amino acid structure Contain an amine group (NH2)
Contain an acid group (COOH) Vary only by R groups
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Proteins Fibrous proteins Also known as structural proteins
Appear in body structures Examples include collagen and keratin Stable Figure 2.17a
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Proteins Globular proteins Also known as functional proteins
Function as antibodies or enzymes Can be denatured Figure 2.17b
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Enzymes Act as biological catalysts
Increase the rate of chemical reactions Figure 2.18a
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Enzymes PLAY Chemistry of Life® Enzymes Animation Figure 2.18b
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Important Organic Compounds
Nucleic Acids Provide blueprint of life Nucleotide bases A = Adenine G = Guanine C = Cytosine T = Thymine U = Uracil Make DNA and RNA Figure 2.19a
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Nucleic Acids Deoxyribonucleic acid (DNA)
Organized by complimentary bases to form double helix Replicates before cell division Provides instructions for every protein in the body Figure 2.19c
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Important Organic Compounds
Adenosine triphosphate (ATP) Chemical energy used by all cells Energy is released by breaking high energy phosphate bond ATP is replenished by oxidation of food fuels
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Adenosine Triphosphate (ATP)
Figure 2.20a
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